Gene
| Gene Model ID | pfu_aug2.0_12580.1_03131 |
|---|---|
| Locus | scaffold12580.1 : 1 ... 3900 : - |
| To GenomeBrowser | scaffold12580.1:1..3900 |
| Genes list of scaffold | scaffold12580.1 |
| Synonym | pfu_aug1.0_10603.1_24768 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ribosomal protein s6 kinase delta-1-like | GO:0016772 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_12580.1_03131.t1 | 2 | 1 | Pkinase | 72 | 146 | 1.1e-13 | 50.9 | 9.8e-07 | 0.0029 | 16.7 |
| pfu_aug2.0_12580.1_03131.t1 | 2 | 2 | Pkinase | 568 | 648 | 1.1e-13 | 50.9 | 3.1e-11 | 9.2e-08 | 31.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_12580.1_03131.t1 | gi|524901243|ref|XP_005107032.1| | PREDICTED: ribosomal protein S6 kinase delta-1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_12580.1_03131.t1 | gi|390354789|ref|XP_784910.3| | PREDICTED: ribosomal protein S6 kinase delta-1 [Strongylocentrotus purpuratus] | 4.99983e-42 |
| pfu_aug2.0_12580.1_03131.t1 | gi|585692691|ref|XP_006821498.1| | PREDICTED: ribosomal protein S6 kinase delta-1-like [Saccoglossus kowalevskii] | 2.0e-37 |
| pfu_aug2.0_12580.1_03131.t1 | gi|676471559|ref|XP_009059214.1| | hypothetical protein LOTGIDRAFT_123756, partial [Lottia gigantea] | 2.0e-34 |
| pfu_aug2.0_12580.1_03131.t1 | gi|241833061|ref|XP_002414920.1| | ribosomal protein S6 kinase, putative [Ixodes scapularis] | 2.0e-27 |
Transcript
| Transcript ID | pfu_aug2.0_12580.1_03131.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_12580.1_03131.t1 gtgacaagaataagtcacgtagggatgctgtacgtagaaagacagctcagtacctactgaaggcagaggacctgtacaac agacacctctctaaagacgtactggatgaaaaacgatgggctgatgacagcaagctatctccgacttatgagttagatcc ctcaattagtatgttgaaaggttcctctggtgatctgaaactgtacaaggtactgggtactatagataaagtactcctag tgatggacaaaaacactgatgaaacatatgtgatgaagaccattcacaagtccgtagatatcaacagcaaaaggatcagg acatttttcccagcccattgtccatacatggtcagtctatataaattctttgagacagattgtgccatacatctgttact tcagcatgctaccggcggaaaactatggaactacataggtgcttatattcaaggccgtaaagatccagttgataatgacg caaatcagttcggaaatgtttatgctggtacgaaactccacgagcacgataattctagtcaagattttaatttagagaaa aaaatgaatggggatactgaaccaaaatccaaattaatggattcgaatgatgtgcttgtgaaatattcagcttcatcagg tgatggagaaagcaagatttctattggtcgaaatattgaggaagattcaaccaatgaaaacacagaatatagaaaagagg aggagcaaaaacaggagcaggaggagggatctatgaagataccagttgataggctagaaagtttctcttctgcagaggat ggctttgagggtcaagaggttaggcctgcttcattggaacaaaaagattttgtctttcaagaactgctacaggatagcaa gtctaatttagaacagtttagtatcataagttcagatagcacgagtagtgattgtagagctagagttgatagttttgtct ttgacaggagtgatatcattcaggaagagaatgaagtgcacggtgattgtgtaggttttgttgatcaagacaatgtattc ggtggtgaaaaaaaatcggatacgccggatcaggatgattctgagattattgtaaaaagtgctagagaattactcaagtc tgtggagaggacgttatcccagactgatgccgaggttaacaaaatgttgaattcgaaagacaatacaggaaaagtgcatc atgatacattagatgttcaaagaacaaaaaatgtgacagaggtagtgacctcaggtcatagcagtgcaactgtgatagat gatagtgactcaaacgaggccagtatatacgatgtacatcattctagcagctccacagattctgattctatagacaagtg ccataaatctgaaaataaaaatagtgctgatgtttcctccgctttgaactgtgatacaaatatgagtgaattttacacaa gtaggagtgaaagaactagtacattaaaagcgaccaatcaagatggagattttggctcggaatcttcggagtcgcccagt agaagtaaaacttctcgctcatcaactctagtcaataattctcctgtcaaaaacgtttcagtgggaaaattaagcttaac gagaatgaattctaaagaattaagtaggtcagcgtccatggaacacgaattgacttcacctccaaggtcgcgacagagaa ctgtgtcagatgtctttaaagacactaatatggttgggagtttggaaaatgtcagattgcccgagtcttgtatcaggcag tggattgcagaaattgtggtggccttaggaaaactgcatgaggagggcataatttgtagagatcttagaccggacaatat acttttgggtgatagaggtcatgtgctactgacctacttttgtcagcttaatcaggttgatcaggaagttgacttcacgg cagtagatgaactttatgttgccccag |
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Protein
| Protein ID | pfu_aug2.0_12580.1_03131.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_12580.1_03131.t1 DKNKSRRDAVRRKTAQYLLKAEDLYNRHLSKDVLDEKRWADDSKLSPTYELDPSISMLKGSSGDLKLYKVLGTIDKVLLV MDKNTDETYVMKTIHKSVDINSKRIRTFFPAHCPYMVSLYKFFETDCAIHLLLQHATGGKLWNYIGAYIQGRKDPVDNDA NQFGNVYAGTKLHEHDNSSQDFNLEKKMNGDTEPKSKLMDSNDVLVKYSASSGDGESKISIGRNIEEDSTNENTEYRKEE EQKQEQEEGSMKIPVDRLESFSSAEDGFEGQEVRPASLEQKDFVFQELLQDSKSNLEQFSIISSDSTSSDCRARVDSFVF DRSDIIQEENEVHGDCVGFVDQDNVFGGEKKSDTPDQDDSEIIVKSARELLKSVERTLSQTDAEVNKMLNSKDNTGKVHH DTLDVQRTKNVTEVVTSGHSSATVIDDSDSNEASIYDVHHSSSSTDSDSIDKCHKSENKNSADVSSALNCDTNMSEFYTS RSERTSTLKATNQDGDFGSESSESPSRSKTSRSSTLVNNSPVKNVSVGKLSLTRMNSKELSRSASMEHELTSPPRSRQRT VSDVFKDTNMVGSLENVRLPESCIRQWIAEIVVALGKLHEEGIICRDLRPDNILLGDRGHVLLTYFCQLNQVDQEVDFTA VDELYVAP |
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