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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_126.1_20282
Locus scaffold126.1 : 17796 ... 39026 : +
To GenomeBrowser scaffold126.1:17796..39026
Genes list of scaffold scaffold126.1
Synonym pfu_aug1.0_24603.1_33450

Manual annotation
Annotation by Blast2GO
Annotation GO
hypothetical protein LOTGIDRAFT_184912 [Lottia gigantea] GO:0005488 GO:0005634 GO:0005737 GO:0006606 GO:0009987 GO:0012505 GO:0016020

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_126.1_20282.t2 6 1 HEAT_2 36 63 1.4e-17 63.7 0.25 220.0 2.2
pfu_aug2.0_126.1_20282.t2 8 1 HEAT 36 64 6.3e-17 60.0 0.058 51.0 4.3
pfu_aug2.0_126.1_20282.t2 7 1 HEAT_EZ 36 63 1.8e-13 50.5 0.045 39.0 4.8
pfu_aug2.0_126.1_20282.t2 4 1 MMS19_C 37 58 4.3e-07 29.0 0.53 460.0 -0.8
pfu_aug2.0_126.1_20282.t2 6 2 HEAT_2 91 190 1.4e-17 63.7 0.00029 0.25 11.6
pfu_aug2.0_126.1_20282.t2 8 2 HEAT 97 112 6.3e-17 60.0 7.7 6700.0 -2.3
pfu_aug2.0_126.1_20282.t2 7 2 HEAT_EZ 97 146 1.8e-13 50.5 0.17 140.0 3.0
pfu_aug2.0_126.1_20282.t2 2 1 Adaptin_N 119 244 1.6e-09 36.6 4.3e-06 0.0038 15.6
pfu_aug2.0_126.1_20282.t2 5 1 Vac14_Fab1_bd 120 180 2.5e-11 43.7 0.55 480.0 1.2
pfu_aug2.0_126.1_20282.t2 8 3 HEAT 127 151 6.3e-17 60.0 0.49 420.0 1.4
pfu_aug2.0_126.1_20282.t2 6 3 HEAT_2 133 197 1.4e-17 63.7 0.01 8.8 6.6
pfu_aug2.0_126.1_20282.t2 5 2 Vac14_Fab1_bd 161 224 2.5e-11 43.7 0.23 200.0 2.4
pfu_aug2.0_126.1_20282.t2 7 3 HEAT_EZ 204 222 1.8e-13 50.5 2.2 1900.0 -0.5
pfu_aug2.0_126.1_20282.t2 4 2 MMS19_C 208 306 4.3e-07 29.0 2.0e-05 0.017 13.8
pfu_aug2.0_126.1_20282.t2 8 4 HEAT 211 225 6.3e-17 60.0 0.74 640.0 0.9
pfu_aug2.0_126.1_20282.t2 7 4 HEAT_EZ 225 240 1.8e-13 50.5 3.1 2700.0 -1.0
pfu_aug2.0_126.1_20282.t2 8 5 HEAT 232 241 6.3e-17 60.0 4.6 4000.0 -1.6
pfu_aug2.0_126.1_20282.t2 5 3 Vac14_Fab1_bd 278 312 2.5e-11 43.7 0.2 170.0 2.6
pfu_aug2.0_126.1_20282.t2 7 5 HEAT_EZ 296 308 1.8e-13 50.5 7.8 6800.0 -2.3
pfu_aug2.0_126.1_20282.t2 2 2 Adaptin_N 328 525 1.6e-09 36.6 6.6e-07 0.00057 18.3
pfu_aug2.0_126.1_20282.t2 6 4 HEAT_2 330 382 1.4e-17 63.7 0.0021 1.8 8.8
pfu_aug2.0_126.1_20282.t2 8 6 HEAT 355 384 6.3e-17 60.0 0.00019 0.17 12.0
pfu_aug2.0_126.1_20282.t2 6 5 HEAT_2 360 461 1.4e-17 63.7 4.5e-14 3.9e-11 43.0
pfu_aug2.0_126.1_20282.t2 7 6 HEAT_EZ 367 421 1.8e-13 50.5 8.6e-12 7.5e-09 35.8
pfu_aug2.0_126.1_20282.t2 5 4 Vac14_Fab1_bd 369 418 2.5e-11 43.7 1.3e-08 1.1e-05 25.7
pfu_aug2.0_126.1_20282.t2 4 3 MMS19_C 392 443 4.3e-07 29.0 0.051 45.0 2.6
pfu_aug2.0_126.1_20282.t2 8 7 HEAT 395 423 6.3e-17 60.0 8.3e-10 7.3e-07 28.7
pfu_aug2.0_126.1_20282.t2 7 7 HEAT_EZ 427 460 1.8e-13 50.5 0.056 49.0 4.5
pfu_aug2.0_126.1_20282.t2 5 5 Vac14_Fab1_bd 431 480 2.5e-11 43.7 0.0091 7.9 6.9
pfu_aug2.0_126.1_20282.t2 8 8 HEAT 437 468 6.3e-17 60.0 0.0015 1.3 9.3
pfu_aug2.0_126.1_20282.t2 4 4 MMS19_C 472 551 4.3e-07 29.0 0.00073 0.64 8.6
pfu_aug2.0_126.1_20282.t2 6 6 HEAT_2 494 539 1.4e-17 63.7 4.3 3800.0 -1.8

Transcript
Transcript IDpfu_aug2.0_126.1_20282.t1
Definition-
>pfu_aug2.0_126.1_20282.t1
atggcggacgaccaggctcagttcgaaacattactgctgacattattgagtactgagaatgaaactagaactcaagctga
ggaggcttacgacaaaatacctggtgcaacaaaagttccattccttgttcagtcactgaaaagtttcaattcatccatag
aggttagaaccttggctgcggttttgctgagaaggctatttactaataccttcgaggagatatggcccactattgcggta
gatttacagaatgccatcaaacagcagctgatgctgatcatccaagaggagataactccaccggttaggaaaaaagtctg
tgatgctgctgccgaattagcaaggaatttgattgatgatgatgagaatatgttatggccagagtttctgaagtttatgt
ttgactgtgccaattcagaagatgctggcctcagagagagtgctttacacatattttgccaagtacctgggatatttggt
aatcaacagacccattacttagacgtgattaagcagatgttgtcacggtccctccatgacaaggaccatcctgacgtatg
gaaagaagccgttaaagcgactactgcgttcctagtggccaacgacaaacaagtgtccctcctcagtcatttcagagacc
tacttcctgcaatgattaagggaatatccgactccgttgaagaacaggacagtgacagtttgttaaagtgcctgatagaa
ttggcagaaaatgttcccaagtatttacggtcacaaatggaacacatattccccttctgtcttaagatcatatcagagac
aaatctggaggactcatggagacagttagggatggaggtgatagtaacattgtctgaaacagctccagccatggtcagaa
aacatgccaagtttatgcctttgttagtgccgcaggtgttagcgttaatggtagacttagaggaggaacctgattggtcg
ttacaagatgaaccagaggacgaggatacagacagtaatgctatagcagcagaaagtgctttggatagactggcttgtgc
ccttggaggaaagactatgcttccacacatactgtcaaacgtacctcaaatgttacagaacaatgactggaggtacagac
acgcggcactcatggcgatatctgcctgcggtgagggctgccatcaacaaatggagggaatgctgggaaatattttagat
gctgtccttccctatttaaaagacccacaccctagagtcagatatgcagcatgtaatgctctgggacagatgtgtacaga
ctttgggccactcttccaaaagaaataccatgagaagttagtaccgaacttactggctgtgatggacgacgaggctaacc
ctcgagtacaggcgcatggtgctgcagctctcgttaacttcagtgaagactgtcctaaaaatatcctggctgactacctg
gacatcattatatgtaaactagaacaagtcctcaatagtaaatttaaagagctgatggagaaaggtacaaaaatggtcct
agaacaggttgtaacaacgttagcgtcagtagctgatacgtccgaggagaaattcacggcttactatgacagatttatgc
cctgtctcaagtatatagtacaaaacgcagtgcaacaagagttacggttactgaggggaaagacgatagaatgcataagt
ctgattgggttagctgtaggtagagataagtttgtaattgaaatgatgggatccccaacaacattcggctacagcatcaa
aacacccaatggaaaatacggagcaggcacgtacaaaaagagacacaaaagggacatggaacacaaactcacacaatag
Transcript IDpfu_aug2.0_126.1_20282.t2
Definition-
>pfu_aug2.0_126.1_20282.t2
atgttttcaaacgaaccagtaatttcggagttggactggtacttgtcctactgtccgtaccacaggggtgaggaggctta
cgacaaaatacctggtgcaacaaaagttccattccttgttcagtcactgaaaagtttcaattcatccatagaggttagaa
ccttggctgcggttttgctgagaaggctatttactaataccttcgaggagatatggcccactattgcggtagatttacag
aatgccatcaaacagcagctgatgctgatcatccaagaggagataactccaccggttaggaaaaaagtctgtgatgctgc
tgccgaattagcaaggaatttgattgatgatgatgagaatatgttatggccagagtttctgaagtttatgtttgactgtg
ccaattcagaagatgctggcctcagagagagtgctttacacatattttgccaagtacctgggatatttggtaatcaacag
acccattacttagacgtgattaagcagatgttgtcacggtccctccatgacaaggaccatcctgacgtatggaaagaagc
cgttaaagcgactactgcgttcctagtggccaacgacaaacaagtgtccctcctcagtcatttcagagacctacttcctg
caatgattaagggaatatccgactccgttgaagaacaggacagtgacagtttgttaaagtgcctgatagaattggcagaa
aatgttcccaagtatttacggtcacaaatggaacacatattccccttctgtcttaagatcatatcagagacaaatctgga
ggactcatggagacagttagggatggaggtgatagtaacattgtctgaaacagctccagccatggtcagaaaacatgcca
agtttatgcctttgttagtgccgcaggtgttagcgttaatggtagacttagaggaggaacctgattggtcgttacaagat
gaaccagaggacgaggatacagacagtaatgctatagcagcagaaagtgctttggatagactggcttgtgcccttggagg
aaagactatgcttccacacatactgtcaaacgtacctcaaatgttacagaacaatgactggaggtacagacacgcggcac
tcatggcgatatctgcctgcggtgagggctgccatcaacaaatggagggaatgctgggaaatattttagatgctgtcctt
ccctatttaaaagacccacaccctagagtcagatatgcagcatgtaatgctctgggacagatgtgtacagactttgggcc
actcttccaaaagaaataccatgagaagttagtaccgaacttactggctgtgatggacgacgaggctaaccctcgagtac
aggcgcatggtgctgcagctctcgttaacttcagtgaagactgtcctaaaaatatcctggctgactacctggacatcatt
atatgtaaactagaacaagtcctcaatagtaaatttaaagagctgatggagaaaggtacaaaaatggtcctagaacaggt
tgtaacaacgttagcgtcagtagctgatacgtccgaggagaaattcacggcttactatgacagatttatgccctgtctca
agtatatagtacaaaacgcagtgcaacaagagttacggttactgaggggaaagacgatagaatgcataagtctgattggg
ttagctgtaggtagagataagtttgtaattgaaatgatgggatccccaacaacattcggctacagcatcaaaacacccaa
tggaaaatacggagcaggcacgtacaaaaagagacacaaaagggacatggaacacaaactcacacaatag

Protein
Protein IDpfu_aug2.0_126.1_20282.t1
Definition-
>pfu_aug2.0_126.1_20282.t1
MADDQAQFETLLLTLLSTENETRTQAEEAYDKIPGATKVPFLVQSLKSFNSSIEVRTLAAVLLRRLFTNTFEEIWPTIAV
DLQNAIKQQLMLIIQEEITPPVRKKVCDAAAELARNLIDDDENMLWPEFLKFMFDCANSEDAGLRESALHIFCQVPGIFG
NQQTHYLDVIKQMLSRSLHDKDHPDVWKEAVKATTAFLVANDKQVSLLSHFRDLLPAMIKGISDSVEEQDSDSLLKCLIE
LAENVPKYLRSQMEHIFPFCLKIISETNLEDSWRQLGMEVIVTLSETAPAMVRKHAKFMPLLVPQVLALMVDLEEEPDWS
LQDEPEDEDTDSNAIAAESALDRLACALGGKTMLPHILSNVPQMLQNNDWRYRHAALMAISACGEGCHQQMEGMLGNILD
AVLPYLKDPHPRVRYAACNALGQMCTDFGPLFQKKYHEKLVPNLLAVMDDEANPRVQAHGAAALVNFSEDCPKNILADYL
DIIICKLEQVLNSKFKELMEKGTKMVLEQVVTTLASVADTSEEKFTAYYDRFMPCLKYIVQNAVQQELRLLRGKTIECIS
LIGLAVGRDKFVIEMMGSPTTFGYSIKTPNGKYGAGTYKKRHKRDMEHKLTQ
Protein IDpfu_aug2.0_126.1_20282.t2
Definition-
>pfu_aug2.0_126.1_20282.t2
MFSNEPVISELDWYLSYCPYHRGEEAYDKIPGATKVPFLVQSLKSFNSSIEVRTLAAVLLRRLFTNTFEEIWPTIAVDLQ
NAIKQQLMLIIQEEITPPVRKKVCDAAAELARNLIDDDENMLWPEFLKFMFDCANSEDAGLRESALHIFCQVPGIFGNQQ
THYLDVIKQMLSRSLHDKDHPDVWKEAVKATTAFLVANDKQVSLLSHFRDLLPAMIKGISDSVEEQDSDSLLKCLIELAE
NVPKYLRSQMEHIFPFCLKIISETNLEDSWRQLGMEVIVTLSETAPAMVRKHAKFMPLLVPQVLALMVDLEEEPDWSLQD
EPEDEDTDSNAIAAESALDRLACALGGKTMLPHILSNVPQMLQNNDWRYRHAALMAISACGEGCHQQMEGMLGNILDAVL
PYLKDPHPRVRYAACNALGQMCTDFGPLFQKKYHEKLVPNLLAVMDDEANPRVQAHGAAALVNFSEDCPKNILADYLDII
ICKLEQVLNSKFKELMEKGTKMVLEQVVTTLASVADTSEEKFTAYYDRFMPCLKYIVQNAVQQELRLLRGKTIECISLIG
LAVGRDKFVIEMMGSPTTFGYSIKTPNGKYGAGTYKKRHKRDMEHKLTQ

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Okinawa Institute of Science and Technology
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