Gene
| Gene Model ID | pfu_aug2.0_126.1_20286 |
|---|---|
| Locus | scaffold126.1 : 174861 ... 189857 : - |
| To GenomeBrowser | scaffold126.1:174861..189857 |
| Genes list of scaffold | scaffold126.1 |
| Synonym | pfu_aug1.0_144891.1_49906 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| mannosyl-oligosaccharide -alpha-mannosidase ib | GO:0004571 GO:0005509 GO:0008152 GO:0016020 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_126.1_20286.t1 | 3 | 1 | Glyco_hydro_47 | 20 | 122 | 0.0 | 474.9 | 7.0e-31 | 3.4e-27 | 95.1 |
| pfu_aug2.0_126.1_20286.t1 | 3 | 2 | Glyco_hydro_47 | 297 | 392 | 0.0 | 474.9 | 1.6e-33 | 7.8e-30 | 103.9 |
| pfu_aug2.0_126.1_20286.t1 | 3 | 3 | Glyco_hydro_47 | 396 | 631 | 0.0 | 474.9 | 0.0 | 0.0 | 278.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_126.1_20286.t1 | gi|524868860|ref|XP_005091228.1| | PREDICTED: mannosyl-oligosaccharide 1,2-alpha-mannosidase IB-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_126.1_20286.t1 | gi|676492291|ref|XP_009065869.1| | hypothetical protein LOTGIDRAFT_222667 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_126.1_20286.t1 | gi|704554515|ref|XP_010180772.1| | PREDICTED: mannosyl-oligosaccharide 1,2-alpha-mannosidase IB-like, partial [Mesitornis unicolor] | 0.0 |
| pfu_aug2.0_126.1_20286.t1 | gi|701337619|ref|XP_009963001.1| | PREDICTED: mannosyl-oligosaccharide 1,2-alpha-mannosidase IB-like, partial [Tyto alba] | 0.0 |
| pfu_aug2.0_126.1_20286.t1 | gi|698399492|ref|XP_009808421.1| | PREDICTED: mannosyl-oligosaccharide 1,2-alpha-mannosidase IB-like, partial [Gavia stellata] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_126.1_20286.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_126.1_20286.t1 atggtcaacacaaaaacgggcagtgctaggaactggggatgggcgtcaggaggctgttctatcttagctgagtttggatc tttccatgtagagttcatgtatctgtcagaaatatcaggaaacaaaatctataaagataaggttatgaaaataagagaaa ctcttcaaagcatagagaaaccaaatggtttatatccaaactatctgaatcctagaactggccgttggggacaacaacac acagctattggtgcattaggagacagtttttatgagtacctccttaaggcatggttacagtcaggaaagaaagataccga ggccaggaagatgtatgatgaagctatcaagggaagaaaaactctgagactgaaagaaaagtatataattatacttgtat ttgccacgtttggtattgtttgttttggtgctttcttctttctacctgaccttcgtgatcgtgttcgtgttgacaacata agaagtcatctacaaaatgtcaacatggttattccacagcacggtgataaaatagacaccgacggccgggggttcaaacg tcatgacgatgataatgttgatcaccatctcgttcacgataaaggggaactgaataaaaaagtaattgaacattgggaac aaataaagaaagaggatgtggaaaagaaacttcagatcccgaaagatcaagttcttgaacatgtgaaagaaaaagagaga gaaaaggaagaattgaaaaaggcaagggaagaagaactgaaaagaaagaaagcagaggaagaggagaaggcaagacaagt aaataaagttcatgagggcggagttggcgcacaaggaggagagccgagtgatgaagacaccaaatccaagagggatacca tacgtgagatgatgaaacatgcatgggttaactatgaaaagtatgcatggggatcaaatgaactgcgaccaataagtaaa aggggccatagtgcaagcatatttggaacactgaatcttggagccaccattattgatgctgcagacactctttacgttat ggaattgatggatgaatacaaaaaagccagagactggattgctacgtcatttagttttgaagggtcaacagagctgtcag tgtttgaaaccaatataagatttgttggtggacttttatctctttacgcacttacaggagacagtgtaaaacacacagct attggtgcattaggagacagtttttatgagtacctccttaaggcatggttacaatcaggaaagaaagataccgaagccag gaagatgtatgatgaagctatcaaggcaatttctgaaaaactagttaagaaatctcagagtggatttacatacgtagcgg aatataaatcaggaagacttgagaacaaaatggaccatttaggctgttttgctggaggaatgttcgctctgggagccgag ggatcggacaataaggagaaatacctgaacttaggagcagaattgtcgcgaacatgtcacgaatcttatgacagatcaga gacaaaattaggaccagaggctttccgatttgatggtaatacagaggctaaagccatcagacaaaatgagaaatactaca tattacgtcctgaagtattagagactcatttctacatgtggagattaaccaaggaccaaaaatatagagattgggcatgg gaagccacccaggccctgaataaacattgtaaggtggagggaggttttacagggcttagagatgtatatcaatctaaccc tccccaagacgatgttcaacagagctttttcttagcagaaacattaaaatatctttatctgacgtttagtgaagacacgc tgcttccgctcgataagtggatttttaatacagaggctcatcctctaccaatcaaaggtgccaatgatattaaggagaat gcctcgtag |
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Protein
| Protein ID | pfu_aug2.0_126.1_20286.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_126.1_20286.t1 MVNTKTGSARNWGWASGGCSILAEFGSFHVEFMYLSEISGNKIYKDKVMKIRETLQSIEKPNGLYPNYLNPRTGRWGQQH TAIGALGDSFYEYLLKAWLQSGKKDTEARKMYDEAIKGRKTLRLKEKYIIILVFATFGIVCFGAFFFLPDLRDRVRVDNI RSHLQNVNMVIPQHGDKIDTDGRGFKRHDDDNVDHHLVHDKGELNKKVIEHWEQIKKEDVEKKLQIPKDQVLEHVKEKER EKEELKKAREEELKRKKAEEEEKARQVNKVHEGGVGAQGGEPSDEDTKSKRDTIREMMKHAWVNYEKYAWGSNELRPISK RGHSASIFGTLNLGATIIDAADTLYVMELMDEYKKARDWIATSFSFEGSTELSVFETNIRFVGGLLSLYALTGDSVKHTA IGALGDSFYEYLLKAWLQSGKKDTEARKMYDEAIKAISEKLVKKSQSGFTYVAEYKSGRLENKMDHLGCFAGGMFALGAE GSDNKEKYLNLGAELSRTCHESYDRSETKLGPEAFRFDGNTEAKAIRQNEKYYILRPEVLETHFYMWRLTKDQKYRDWAW EATQALNKHCKVEGGFTGLRDVYQSNPPQDDVQQSFFLAETLKYLYLTFSEDTLLPLDKWIFNTEAHPLPIKGANDIKEN AS |
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