Gene
| Gene Model ID | pfu_aug2.0_126.1_20290 |
|---|---|
| Locus | scaffold126.1 : 323357 ... 338289 : + |
| To GenomeBrowser | scaffold126.1:323357..338289 |
| Genes list of scaffold | scaffold126.1 |
| Synonym | pfu_aug1.0_5652.1_16728 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| homeotic protein ultrabithorax-like isoform x1 | GO:0005634 GO:0006355 GO:0043565 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_126.1_20290.t1 | 1 | 1 | Homeobox | 190 | 246 | 1.1e-20 | 72.9 | 3.5e-24 | 2.6e-20 | 71.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_126.1_20290.t1 | gi|675857966|ref|XP_009014543.1| | hypothetical protein HELRODRAFT_76830 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_126.1_20290.t1 | gi|676432037|ref|XP_009046444.1| | hypothetical protein LOTGIDRAFT_185752 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_126.1_20290.t1 | gi|524912225|ref|XP_005110963.1| | PREDICTED: homeobox protein abdominal-A homolog, partial [Aplysia californica] | 8.00141e-43 |
| pfu_aug2.0_126.1_20290.t1 | gi|569532284|gb|AHE41131.1| | abdominal-A transcript variant E [Bombyx mori] | 6.00036e-42 |
| pfu_aug2.0_126.1_20290.t1 | gi|58382033|ref|XP_311624.2| | AGAP004661-PB [Anopheles gambiae str. PEST] | 9.99967e-42 |
Transcript
| Transcript ID | pfu_aug2.0_126.1_20290.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_126.1_20290.t1 atgaactcgtactatcccgcgtctttttttgctcagtattccacagaaaattcacatataccgcataatgtgtcgtataa ttctaacaattttggattactaagtcgttttgccgaccatattagtgcttaccatcataataacagctttaccggtgacc atcatcagagattatctaacggattctcttctcatcatcaggacacttcacaattcatatctagggacaataataactcc acaaaccatggacggatgcagaattatccgcaaccagcgccagcacatcagggtgaggatagcagcgccgtttcccgacc ctacaactcatgtagcccggacagttggagtcccccaccccatggggtaccctcggggtcgccagactcaggtcaccacc aaagtaccagcccctaccccacgggcatggaaaattctaacaccccgtgtaacatgatgcttcaaaaacacatgaaaagc gaccacggttcacagtctcccactacagacccagccacgcccttttacccttggatggggatcgtgggacctaactcagc acacagacgtaggggcagacagacgtacagccggtatcaaacgttggaactcgagaaagaattccagttcaatcactacc ttacacggaaacggaggatagaagtcgcgcatgcgctgtgcttgactgagagacaaattaaaatctggtttcagaatcgt cgtatgaaacttaagaaggagcggcaggcgataaaggacttaaacgaagcctcaattctaccaaacgggaagaaatctga cgatgatgataaaagtgacgatatgattttttcgcgccagttaagtgagttgatacacacattttacctcaagactatca catga |
|
Protein
| Protein ID | pfu_aug2.0_126.1_20290.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_126.1_20290.t1 MNSYYPASFFAQYSTENSHIPHNVSYNSNNFGLLSRFADHISAYHHNNSFTGDHHQRLSNGFSSHHQDTSQFISRDNNNS TNHGRMQNYPQPAPAHQGEDSSAVSRPYNSCSPDSWSPPPHGVPSGSPDSGHHQSTSPYPTGMENSNTPCNMMLQKHMKS DHGSQSPTTDPATPFYPWMGIVGPNSAHRRRGRQTYSRYQTLELEKEFQFNHYLTRKRRIEVAHALCLTERQIKIWFQNR RMKLKKERQAIKDLNEASILPNGKKSDDDDKSDDMIFSRQLSELIHTFYLKTIT |
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