Gene
| Gene Model ID | pfu_aug2.0_126.1_20291 |
|---|---|
| Locus | scaffold126.1 : 393447 ... 410832 : + |
| To GenomeBrowser | scaffold126.1:393447..410832 |
| Genes list of scaffold | scaffold126.1 |
| Synonym | pfu_aug1.0_422.1_43655 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| homeobox protein hox-b7 | GO:0009987 GO:0048513 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_126.1_20291.t1 | 1 | 1 | Homeobox | 141 | 197 | 6.6e-22 | 76.8 | 1.6e-25 | 1.2e-21 | 76.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_126.1_20291.t1 | gi|632965012|ref|XP_007898680.1| | PREDICTED: homeobox protein Hox-A7 [Callorhinchus milii] | 4.0e-31 |
| pfu_aug2.0_126.1_20291.t1 | gi|410980865|ref|XP_003996794.1| | PREDICTED: homeobox protein Hox-B7 [Felis catus] | 4.0e-31 |
| pfu_aug2.0_126.1_20291.t1 | gi|301762934|ref|XP_002916869.1| | PREDICTED: homeobox protein Hox-B7 [Ailuropoda melanoleuca] | 4.0e-31 |
| pfu_aug2.0_126.1_20291.t1 | gi|472350963|ref|XP_004395166.1| | PREDICTED: homeobox protein Hox-B7 [Odobenus rosmarus divergens] | 4.0e-31 |
| pfu_aug2.0_126.1_20291.t1 | gi|426237815|ref|XP_004012853.1| | PREDICTED: homeobox protein Hox-B7 [Ovis aries] | 4.0e-31 |
Transcript
| Transcript ID | pfu_aug2.0_126.1_20291.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_126.1_20291.t1 atgagctcttacgtaccgaacaattgtgctgaatatattggtcacggtgataattataaggttttctacacacaagggtg tcagcaaattatgaacgattctacctacggtccagaccagcaatgtaacacatggtcaaacggaccatcatatccaacct cagaatcagtagaatcgaacactcccagaacaatgtgcaccagaccatattacaatgacgctatgccacacgactacaca atgagatccaatcacaattcaacgtctgatccattttcacgacacacaccctgcaatggactcactgtccaaaagcgtga catccgaaatcagagtgatctgagcacggacatcggacagaagatgagcaatttccgtccaatgttcccctggatgaaaa atatgaaagatataggtagaaaacgaggtcgtaagacatacaccagacaccaaacccttgaactagagaaggaattccta tacaaccgatacttgacccgccggcgtcgacaggagatcgcctccgccctcagcctgactgagaggcaggtcaaaatatg gttccagaacaggagaatgaagttcaaaaaggagaccaaatatgaagacattgatccccatctagaactgacacatggac cctctgtatag |
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Protein
| Protein ID | pfu_aug2.0_126.1_20291.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_126.1_20291.t1 MSSYVPNNCAEYIGHGDNYKVFYTQGCQQIMNDSTYGPDQQCNTWSNGPSYPTSESVESNTPRTMCTRPYYNDAMPHDYT MRSNHNSTSDPFSRHTPCNGLTVQKRDIRNQSDLSTDIGQKMSNFRPMFPWMKNMKDIGRKRGRKTYTRHQTLELEKEFL YNRYLTRRRRQEIASALSLTERQVKIWFQNRRMKFKKETKYEDIDPHLELTHGPSV |
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