Gene
| Gene Model ID | pfu_aug2.0_1260.1_01499 |
|---|---|
| Locus | scaffold1260.1 : 1016 ... 1906 : + |
| To GenomeBrowser | scaffold1260.1:1016..1906 |
| Genes list of scaffold | scaffold1260.1 |
| Synonym | pfu_aug1.0_27691.1_69847 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1260.1_01499.t1 | 1 | 1 | C1q | 62 | 186 | 1.6e-18 | 66.9 | 1.5e-22 | 2.2e-18 | 66.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1260.1_01499.t1 | gi|617443971|ref|XP_007566158.1| | PREDICTED: complement C1q-like protein 4 [Poecilia formosa] | 2.0e-11 |
| pfu_aug2.0_1260.1_01499.t1 | gi|551496701|ref|XP_005799907.1| | PREDICTED: complement C1q-like protein 4-like [Xiphophorus maculatus] | 2.0e-11 |
| pfu_aug2.0_1260.1_01499.t1 | gi|584026078|ref|XP_006807620.1| | PREDICTED: complement C1q-like protein 4-like [Neolamprologus brichardi] | 2.0e-11 |
| pfu_aug2.0_1260.1_01499.t1 | gi|554828747|ref|XP_005924974.1| | PREDICTED: complement C1q-like protein 4-like [Haplochromis burtoni] | 2.0e-11 |
Transcript
| Transcript ID | pfu_aug2.0_1260.1_01499.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1260.1_01499.t1 atgctggttttatttattctactatcaaccgcgcatgtggccgataacagttgccatgggaacgttgatgcttttgtgag aaggatctttaaagaggctaaatattctatggacacaaacgacctgttggcattaacagatatgagaagttcgtgtacat caactcaacaagatcgtgtctacttttctgcatatctgaggacccatatcgacatttcttctcttaaaagagggcaacca atagcttttactgatgtcgtcacaaatcagggtggggtatacagccccagatcaggggaatttacagctcctagaaacgg tggatactccatctcttgggaatttctggtattccctaacgccagcattacccttgagttgcagataaataaagagttgt ttgcccatggcattgcttacggtgcagactcacggtatcaaatctcaagtaaaagtactatcgttaacctgaagaaggga gacaaagttagagttgtattctacggtggactaggtttacttcatggaactcataggtatacgggattttccggattcag tttgtaa |
|
Protein
| Protein ID | pfu_aug2.0_1260.1_01499.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1260.1_01499.t1 MLVLFILLSTAHVADNSCHGNVDAFVRRIFKEAKYSMDTNDLLALTDMRSSCTSTQQDRVYFSAYLRTHIDISSLKRGQP IAFTDVVTNQGGVYSPRSGEFTAPRNGGYSISWEFLVFPNASITLELQINKELFAHGIAYGADSRYQISSKSTIVNLKKG DKVRVVFYGGLGLLHGTHRYTGFSGFSL |
|