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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1260.1_01501
Locus scaffold1260.1 : 84136 ... 104907 : +
To GenomeBrowser scaffold1260.1:84136..104907
Genes list of scaffold scaffold1260.1
Synonym pfu_aug1.0_2268.1_08277

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_1260.1_01501.t1 2 1 7tm_1 44 106 5.4e-30 104.3 1.8e-12 1.3e-08 34.2
pfu_aug2.0_1260.1_01501.t1 2 2 7tm_1 131 279 5.4e-30 104.3 5.7e-24 4.2e-20 71.9

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1260.1_01501.t1 gi|676478111|ref|XP_009061331.1| hypothetical protein LOTGIDRAFT_126859, partial [Lottia gigantea] 0.0
pfu_aug2.0_1260.1_01501.t1 gi|134031978|ref|NP_001076795.1| cardioacceleratory peptide receptor 2 [Tribolium castaneum] 0.0
pfu_aug2.0_1260.1_01501.t1 gi|328713510|ref|XP_003245097.1| PREDICTED: cardioacceleratory peptide receptor-like [Acyrthosiphon pisum] 0.0
pfu_aug2.0_1260.1_01501.t1 gi|642921890|ref|XP_008192932.1| PREDICTED: cardioacceleratory peptide receptor 2 isoform X1 [Tribolium castaneum] 0.0
pfu_aug2.0_1260.1_01501.t1 gi|755928161|ref|XP_011306649.1| PREDICTED: cardioacceleratory peptide receptor-like isoform X3 [Fopius arisanus] 0.0

Transcript
Transcript IDpfu_aug2.0_1260.1_01501.t1
Definition-
>pfu_aug2.0_1260.1_01501.t1
atggtagtgagaccaggtgtccaggaagaatttacttgttggtctactaagcgtgctaccagacctggttctgagattta
ctctggaattttatggtggacaggtggtttgcaagatcacaaaatattcaatgatttacttgttggtctactaagcgttc
taccagacctggtactgagatttactctggaattttatggtggacaggtggtttgcaagatcacaaaatattcaatggcg
ctagtgacttacggatcaacgtttgtgttggttgcactaagtattgaccgcttggacgctatagccagaccgctcagatt
ctcagatggaggtatgaaaactaactttaattatactttaaggtggagtatccttcatgtcaggaatgcctattatctta
agatatacctgactttagtggctaccttggtattttttatccccgccatcattatagcgatatgttatggtgctatgatt
tgtattatatggagacacacccagatccccaaatgtggagaaaaagtttcctgtacaacgcctatgtatccaaaagatgg
atacgaaaacgacaactcacgccaaaagcgtcccttccggtttcgtggcagagatacgtccatgagctcgcgcggagtga
taccacaagctaaaattagaacaataaagatgacgttcgttattattttagtgttcatcctgtgctggagtccatttttc
atctataatttgttgtctgtgtacggagttattccccttgatcagaccaccattgccatgtcagctttcatacagagttt
agcgcccttgaacagcgctgccaatcctatgatttacggtgtattcagtactcgcatatgccgacaactcaggaccagta
cattaactgtcgtacattaa

Protein
Protein IDpfu_aug2.0_1260.1_01501.t1
Definition-
>pfu_aug2.0_1260.1_01501.t1
MVVRPGVQEEFTCWSTKRATRPGSEIYSGILWWTGGLQDHKIFNDLLVGLLSVLPDLVLRFTLEFYGGQVVCKITKYSMA
LVTYGSTFVLVALSIDRLDAIARPLRFSDGGMKTNFNYTLRWSILHVRNAYYLKIYLTLVATLVFFIPAIIIAICYGAMI
CIIWRHTQIPKCGEKVSCTTPMYPKDGYENDNSRQKRPFRFRGRDTSMSSRGVIPQAKIRTIKMTFVIILVFILCWSPFF
IYNLLSVYGVIPLDQTTIAMSAFIQSLAPLNSAANPMIYGVFSTRICRQLRTSTLTVVH

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