Gene
| Gene Model ID | pfu_aug2.0_1260.1_01502 |
|---|---|
| Locus | scaffold1260.1 : 112318 ... 135915 : - |
| To GenomeBrowser | scaffold1260.1:112318..135915 |
| Genes list of scaffold | scaffold1260.1 |
| Synonym | pfu_aug1.0_2268.1_08276 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| importin subunit beta-1 | GO:0000060 GO:0005643 GO:0005654 GO:0005829 GO:0006309 GO:0006607 GO:0006610 GO:0008139 GO:0008270 GO:0008536 GO:0008565 GO:0019221 GO:0019904 GO:0031965 GO:0044281 GO:0044822 GO:0070062 GO:0071782 GO:0075733 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1260.1_01502.t1 | 4 | 1 | IBN_N | 23 | 96 | 1.4e-21 | 76.1 | 2.1e-13 | 2.8e-10 | 39.9 |
| pfu_aug2.0_1260.1_01502.t1 | 9 | 1 | HEAT_EZ | 29 | 57 | 7.0e-18 | 64.5 | 2.9 | 3900.0 | -1.5 |
| pfu_aug2.0_1260.1_01502.t1 | 4 | 2 | IBN_N | 98 | 163 | 1.4e-21 | 76.1 | 2.8e-12 | 3.7e-09 | 36.3 |
| pfu_aug2.0_1260.1_01502.t1 | 6 | 1 | Arm | 147 | 162 | 5.2e-07 | 29.2 | 2.9 | 3900.0 | -2.1 |
| pfu_aug2.0_1260.1_01502.t1 | 5 | 1 | HEAT_2 | 155 | 261 | 3.2e-17 | 62.5 | 0.00018 | 0.25 | 11.6 |
| pfu_aug2.0_1260.1_01502.t1 | 9 | 2 | HEAT_EZ | 171 | 219 | 7.0e-18 | 64.5 | 0.13 | 170.0 | 2.8 |
| pfu_aug2.0_1260.1_01502.t1 | 6 | 2 | Arm | 207 | 221 | 5.2e-07 | 29.2 | 1.9 | 2600.0 | -1.6 |
| pfu_aug2.0_1260.1_01502.t1 | 9 | 3 | HEAT_EZ | 208 | 261 | 7.0e-18 | 64.5 | 0.0018 | 2.4 | 8.7 |
| pfu_aug2.0_1260.1_01502.t1 | 7 | 1 | HEAT | 210 | 222 | 9.4e-20 | 68.8 | 1.3 | 1700.0 | -0.5 |
| pfu_aug2.0_1260.1_01502.t1 | 4 | 3 | IBN_N | 234 | 266 | 1.4e-21 | 76.1 | 0.13 | 180.0 | 2.1 |
| pfu_aug2.0_1260.1_01502.t1 | 7 | 2 | HEAT | 237 | 262 | 9.4e-20 | 68.8 | 0.024 | 32.0 | 4.9 |
| pfu_aug2.0_1260.1_01502.t1 | 5 | 2 | HEAT_2 | 249 | 307 | 3.2e-17 | 62.5 | 0.023 | 31.0 | 4.9 |
| pfu_aug2.0_1260.1_01502.t1 | 6 | 3 | Arm | 249 | 263 | 5.2e-07 | 29.2 | 0.49 | 660.0 | 0.3 |
| pfu_aug2.0_1260.1_01502.t1 | 7 | 3 | HEAT | 281 | 309 | 9.4e-20 | 68.8 | 0.00012 | 0.16 | 12.1 |
| pfu_aug2.0_1260.1_01502.t1 | 9 | 4 | HEAT_EZ | 284 | 306 | 7.0e-18 | 64.5 | 3.3 | 4400.0 | -1.7 |
| pfu_aug2.0_1260.1_01502.t1 | 7 | 4 | HEAT | 430 | 458 | 9.4e-20 | 68.8 | 2.7e-06 | 0.0037 | 17.2 |
| pfu_aug2.0_1260.1_01502.t1 | 5 | 3 | HEAT_2 | 432 | 519 | 3.2e-17 | 62.5 | 6.5e-10 | 8.7e-07 | 29.1 |
| pfu_aug2.0_1260.1_01502.t1 | 9 | 5 | HEAT_EZ | 443 | 497 | 7.0e-18 | 64.5 | 1.2e-11 | 1.6e-08 | 34.7 |
| pfu_aug2.0_1260.1_01502.t1 | 6 | 4 | Arm | 468 | 499 | 5.2e-07 | 29.2 | 2.0e-05 | 0.027 | 14.2 |
| pfu_aug2.0_1260.1_01502.t1 | 7 | 5 | HEAT | 473 | 501 | 9.4e-20 | 68.8 | 2.9e-08 | 3.9e-05 | 23.3 |
| pfu_aug2.0_1260.1_01502.t1 | 9 | 6 | HEAT_EZ | 487 | 540 | 7.0e-18 | 64.5 | 3.9e-06 | 0.0053 | 17.2 |
| pfu_aug2.0_1260.1_01502.t1 | 6 | 5 | Arm | 504 | 541 | 5.2e-07 | 29.2 | 0.00012 | 0.16 | 11.8 |
| pfu_aug2.0_1260.1_01502.t1 | 5 | 4 | HEAT_2 | 515 | 608 | 3.2e-17 | 62.5 | 0.0018 | 2.4 | 8.4 |
| pfu_aug2.0_1260.1_01502.t1 | 7 | 6 | HEAT | 526 | 542 | 9.4e-20 | 68.8 | 0.46 | 620.0 | 0.9 |
| pfu_aug2.0_1260.1_01502.t1 | 4 | 4 | IBN_N | 573 | 602 | 1.4e-21 | 76.1 | 5.6 | 7600.0 | -3.1 |
| pfu_aug2.0_1260.1_01502.t1 | 7 | 7 | HEAT | 587 | 601 | 9.4e-20 | 68.8 | 0.72 | 970.0 | 0.3 |
| pfu_aug2.0_1260.1_01502.t1 | 9 | 7 | HEAT_EZ | 587 | 595 | 7.0e-18 | 64.5 | 1.0 | 1300.0 | 0.0 |
| pfu_aug2.0_1260.1_01502.t1 | 9 | 8 | HEAT_EZ | 655 | 695 | 7.0e-18 | 64.5 | 0.32 | 440.0 | 1.5 |
| pfu_aug2.0_1260.1_01502.t1 | 6 | 6 | Arm | 687 | 697 | 5.2e-07 | 29.2 | 4.8 | 6500.0 | -2.8 |
| pfu_aug2.0_1260.1_01502.t1 | 9 | 9 | HEAT_EZ | 688 | 735 | 7.0e-18 | 64.5 | 0.85 | 1100.0 | 0.2 |
| pfu_aug2.0_1260.1_01502.t1 | 5 | 5 | HEAT_2 | 700 | 736 | 3.2e-17 | 62.5 | 1.2 | 1600.0 | -0.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1260.1_01502.t1 | gi|325296735|ref|NP_001191603.1| | importin beta 1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1260.1_01502.t1 | gi|676433915|ref|XP_009047056.1| | hypothetical protein LOTGIDRAFT_199879 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1260.1_01502.t1 | gi|675873094|ref|XP_009022107.1| | hypothetical protein HELRODRAFT_101408 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_1260.1_01502.t1 | gi|126308210|ref|XP_001366856.1| | PREDICTED: importin subunit beta-1 [Monodelphis domestica] | 0.0 |
| pfu_aug2.0_1260.1_01502.t1 | gi|350590384|ref|XP_003131576.3| | PREDICTED: importin subunit beta-1 isoformX1 [Sus scrofa] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1260.1_01502.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1260.1_01502.t1 atgggtcctgggcaatttttatgcgtcagagacacaggactcggagatcagcatgaactagaggcagctcagcagtttct agaacaggcttctcaaacaaacttggaggagtttctgaagtccttgtctgagatactgaagcatggaggtcattctgccg tggttcgtatgcaggcaggtattcagctgaagaatgcgttatattccaaggaccaggcaataaaagccgaatacgctcaa agatggctacagttcccagagccctcacgaattctcatcaagcaaaatgaggagtttctgaagtccttgtctgagatact gaagcatggaggtcattctgccgtggttcgtatgcaggcaggtattcagctgaagaatgcgttatattccaaggaccagg caataaaagccgaatacgctcaaagatggctacagttcccagagccctcacgaattctcatcaagcaaaatgttctggca gcactgggtacagagacgatacgaccaagctccgcagcacagtgtgtggcttacatagcgtgtgcagaattacccatgag cctctggcctgacctgatcgccacgttaacgagcaatgtgaccaatcagaacagcactgagatgatgaaggaagctaccc ttgaggccattggttacatctgccaggatatagacccagaaattttacagacacaatcaaacgaaattctgacagctata gtacatgggatgaagaaggaagaaccaagtaaccatgtgaggttggcagccaccacggcgctccttaactcccttgaatt caccaaggctaactttgacaaagagacagagcggcatttcatcatgcaagttgtgtgtgaggccacccagtccacagatc atagggttaaagtggctgccctccagtgcctggtgaagattatgagtttgtactatcagtatatggaacattacatgggg cctgccttgtttgctataacgatggaagccatgaagagtgaagtagatgagatagcgctacagggtatagaattctggtc aactgtctgtgatgaagaagtagatctagctatagaacaagctgaggctgcagaacaagggcgtccacctgagagaacaa gtaggttttatgccaagggagcattacaatacctagcccctatactgttacataccctcaccaagcaggaggaagtagac gacgacgatgagtggaatccgtgtaaagctgccggggtttgtctgatgctgatggccacaggatgtgaagatgatatcgt acctcacgttttaccgttcgttaaagaccatatacacgatcaggactggagatttagggatgcagctgttatggcatttg gttccattctggaaggtcccgacacaagtaaactgaaaccaatagtagagcaagcaatgcccatgttaatagaactatta aaagacactagtgtagtggtacgtgacacagcagcctggagtgtaggccgcgtgtgtgagattctcccggaagctgtgat aaatgaacaaagtttgccgccgttattattagctctcggtgaaggattaacggccgaaccacgagtggcaagcaatgtat gctgggcgttttccagtctggcagaagcagcttacgagaacgcagaatgtgcagatgaaaactcagaacccaatacgtat tgtttatcaacgtactttgaaaccattatagacaaattgttacaaactacagatagatctgatggaaatcaacataattt acgtaatgcagcatatgaagccctgatggaaatgatcaaaaatagtcccaaggactgctacgcaatagtacagaaaacaa cagtgatagtattagagaaattagaccgagttttacaaatggagaacatgatacaggtgtcgacagatagagcccaatat aacgatctacagtcacttctttgtgccacattacagagtgtattacggaaagttacgccagacgatgcaccaaagatatc tgaccaggttatgagtgctttgttacgcatgttcagtacgtcgggagggaagaccggcggagtacaagaagacgccctac tagccgtgtcgactctagtagaagttttaggagagaattttctgaagtatatggaagcgttcaaacctttcttagccaca agtttgaaaaattctgaagaatacacggtatgtgttgccgcagtaggattaaattccacggttcatcggtcagtgaagcc ccagatcttgtcagtgtttggtgatatagccctagccattggtccgtactttaagaattacctagaatatgtgatgaata ctctacaacaggcttcccaggctcaagtagataagactgactatgacatgatagattatctgaatgagcttcgaaacgga tgtctagaggcgtataccggtattgtacagggtctaaaaggggatggagagaaaccctcagaggatgtacagttaataca accccaccttggtcatatagtgtccttcatagaacatatagctctagatgaagatcattccgatgaaaatatcgccgcta gttgtggtcttataggtgacttatgcacagcttttggcaatacgatactacatggtatagatcgtgaacctatacaaggc ttactcaccaaaggcaggagatcaaaggcttctaaatccaaaactctagctacatgggcaactaaagaaattaggaaact caaaaatgcttctacatgataa |
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Protein
| Protein ID | pfu_aug2.0_1260.1_01502.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1260.1_01502.t1 MGPGQFLCVRDTGLGDQHELEAAQQFLEQASQTNLEEFLKSLSEILKHGGHSAVVRMQAGIQLKNALYSKDQAIKAEYAQ RWLQFPEPSRILIKQNEEFLKSLSEILKHGGHSAVVRMQAGIQLKNALYSKDQAIKAEYAQRWLQFPEPSRILIKQNVLA ALGTETIRPSSAAQCVAYIACAELPMSLWPDLIATLTSNVTNQNSTEMMKEATLEAIGYICQDIDPEILQTQSNEILTAI VHGMKKEEPSNHVRLAATTALLNSLEFTKANFDKETERHFIMQVVCEATQSTDHRVKVAALQCLVKIMSLYYQYMEHYMG PALFAITMEAMKSEVDEIALQGIEFWSTVCDEEVDLAIEQAEAAEQGRPPERTSRFYAKGALQYLAPILLHTLTKQEEVD DDDEWNPCKAAGVCLMLMATGCEDDIVPHVLPFVKDHIHDQDWRFRDAAVMAFGSILEGPDTSKLKPIVEQAMPMLIELL KDTSVVVRDTAAWSVGRVCEILPEAVINEQSLPPLLLALGEGLTAEPRVASNVCWAFSSLAEAAYENAECADENSEPNTY CLSTYFETIIDKLLQTTDRSDGNQHNLRNAAYEALMEMIKNSPKDCYAIVQKTTVIVLEKLDRVLQMENMIQVSTDRAQY NDLQSLLCATLQSVLRKVTPDDAPKISDQVMSALLRMFSTSGGKTGGVQEDALLAVSTLVEVLGENFLKYMEAFKPFLAT SLKNSEEYTVCVAAVGLNSTVHRSVKPQILSVFGDIALAIGPYFKNYLEYVMNTLQQASQAQVDKTDYDMIDYLNELRNG CLEAYTGIVQGLKGDGEKPSEDVQLIQPHLGHIVSFIEHIALDEDHSDENIAASCGLIGDLCTAFGNTILHGIDREPIQG LLTKGRRSKASKSKTLATWATKEIRKLKNASTX |
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