Gene
| Gene Model ID | pfu_aug2.0_12614.1_16480 |
|---|---|
| Locus | scaffold12614.1 : 1066 ... 3433 : + |
| To GenomeBrowser | scaffold12614.1:1066..3433 |
| Genes list of scaffold | scaffold12614.1 |
| Synonym | pfu_aug1.0_5261.1_52503 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_12614.1_16480.t1 | 2 | 1 | zf-B_box | 16 | 56 | 1.9e-11 | 43.6 | 5.9e-06 | 0.0067 | 16.2 |
| pfu_aug2.0_12614.1_16480.t1 | 2 | 2 | zf-B_box | 70 | 104 | 1.9e-11 | 43.6 | 4.0e-11 | 4.6e-08 | 32.8 |
| pfu_aug2.0_12614.1_16480.t1 | 3 | 1 | Reg_prop | 294 | 310 | 2.5e-06 | 26.8 | 7.4e-05 | 0.084 | 12.9 |
| pfu_aug2.0_12614.1_16480.t1 | 5 | 1 | NHL | 295 | 306 | 2.4e-08 | 33.5 | 1.1 | 1200.0 | -0.3 |
| pfu_aug2.0_12614.1_16480.t1 | 2 | 1 | SGL | 295 | 337 | 3.5e-07 | 29.8 | 2.0e-05 | 0.023 | 14.0 |
| pfu_aug2.0_12614.1_16480.t1 | 5 | 2 | NHL | 331 | 346 | 2.4e-08 | 33.5 | 0.0024 | 2.7 | 8.0 |
| pfu_aug2.0_12614.1_16480.t1 | 3 | 2 | Reg_prop | 420 | 431 | 2.5e-06 | 26.8 | 0.51 | 580.0 | 1.1 |
| pfu_aug2.0_12614.1_16480.t1 | 2 | 2 | SGL | 422 | 451 | 3.5e-07 | 29.8 | 0.018 | 21.0 | 4.3 |
| pfu_aug2.0_12614.1_16480.t1 | 5 | 3 | NHL | 423 | 437 | 2.4e-08 | 33.5 | 0.0036 | 4.1 | 7.5 |
| pfu_aug2.0_12614.1_16480.t1 | 5 | 4 | NHL | 460 | 472 | 2.4e-08 | 33.5 | 0.11 | 120.0 | 2.9 |
| pfu_aug2.0_12614.1_16480.t1 | 5 | 5 | NHL | 504 | 519 | 2.4e-08 | 33.5 | 0.0014 | 1.6 | 8.7 |
| pfu_aug2.0_12614.1_16480.t1 | 3 | 3 | Reg_prop | 506 | 520 | 2.5e-06 | 26.8 | 0.0014 | 1.6 | 9.0 |
Transcript
| Transcript ID | pfu_aug2.0_12614.1_16480.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_12614.1_16480.t1 atggccctttcgaaatcagtgaacttggagcatgcccaaacggccgttccatgcgacgcctgtgaagacgaaattcccgg agaatactactgtatagagtgcaaacatactctctgtcctccatgtgagaaactgcatagaaagttcaccaaaggtcaca atgtagtactaaggacccaagtaggtgacatagataccacaatcctgacctgtactgaccatggaagccaagcctcattt cattgtgagaaatgtaacacaacggtctgtggtaaatgtatcactggaaaacacagaggacatgagatgtctgatctgac tgacctttataagaaggaaaaacaagtccttcaacatgatattactagaatggaagcaactttaagaaaattcaagagag agagagacgaagttataacggaaaagcaaaagtatgatagcaaaatacaggaaacaaccacagatttggaaactgagaag aagtctgccatgaaagagctggatagaatttataacgataaaatgaaatacttagcaagcatccgacagacacaatcatc aatctttgaggttcgtagtacagaaatcaagaacaaaatggatacactggatgggagaataacagagtacaagaaaacca tgaagaaagacatccttccatccgtaatccaactttccagaagaaaggagtcaatccctgagataggcaataaaccagag atacctgaccctccagttttcgtacctgggagcttacataaactgggggaatatgtaggaaacttacaaatatatccttc cacggcagcaggaggaaagccaagacagccattgaaacttatatccccggtgattgtatcaaagttcaagtctgaattat cctgtatatgtattaccaaggagggtaatgtttggcttggtggatgggattcaagcgagctggtaatggtggacatcaaa ggtcgggtcctcaggaggagaagaataaagaacagaccgacatcacttgctgtgatggactgtggagacgtcatcataag ccccaatagtaatgattccacgtcagtcagcagatgtctgagagatgggagagagcaacaaatctttgatataacatcgc ctcatttagtgtccaccaccgctaaccagaagatactgatttgtacaaaagatgggagggtagtgaggatcaatggtgac gggtctaacatcaaagaaatctataggggctctggtgatgactcagctatacatgctgtagagaatgctgatggaaacat ttatataagtgaccgtaacaagtcagctgttgtaatgatcaccaaagatggcaaagtcttgacaacaataacacaaactg tagaaggagaaaaattaaaatggccactaggattagtggtagacaaaatgggtgacactttatgtacagattttgaaaag gcttgcgtgtatatcattaatcagaatgggcagatgaggaaattgatagatagttcagtttgccaccagaggcctcgcac tctggctgtggataatgacaacaatctgtggataacacattacgatggaactgtcctcgttgtgaagtacatactgtaa |
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Protein
| Protein ID | pfu_aug2.0_12614.1_16480.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_12614.1_16480.t1 MALSKSVNLEHAQTAVPCDACEDEIPGEYYCIECKHTLCPPCEKLHRKFTKGHNVVLRTQVGDIDTTILTCTDHGSQASF HCEKCNTTVCGKCITGKHRGHEMSDLTDLYKKEKQVLQHDITRMEATLRKFKRERDEVITEKQKYDSKIQETTTDLETEK KSAMKELDRIYNDKMKYLASIRQTQSSIFEVRSTEIKNKMDTLDGRITEYKKTMKKDILPSVIQLSRRKESIPEIGNKPE IPDPPVFVPGSLHKLGEYVGNLQIYPSTAAGGKPRQPLKLISPVIVSKFKSELSCICITKEGNVWLGGWDSSELVMVDIK GRVLRRRRIKNRPTSLAVMDCGDVIISPNSNDSTSVSRCLRDGREQQIFDITSPHLVSTTANQKILICTKDGRVVRINGD GSNIKEIYRGSGDDSAIHAVENADGNIYISDRNKSAVVMITKDGKVLTTITQTVEGEKLKWPLGLVVDKMGDTLCTDFEK ACVYIINQNGQMRKLIDSSVCHQRPRTLAVDNDNNLWITHYDGTVLVVKYIL |
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