Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1263.1_11547
Locus scaffold1263.1 : 1 ... 8868 : +
To GenomeBrowser scaffold1263.1:1..8868
Genes list of scaffold scaffold1263.1
Synonym pfu_aug1.0_89971.1_13431

Manual annotation
Annotation by Blast2GO
Annotation GO
solute carrier family 23 member 1-like GO:0006810

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_1263.1_11547.t1 1 1 Xan_ur_permease 3 321 0.0 223.5 0.0 0.0 223.3

Transcript
Transcript IDpfu_aug2.0_1263.1_11547.t1
Definition-
>pfu_aug2.0_1263.1_11547.t1
ttggagggcagcttgatgttggcaggtggcatccactttttgataggggccacaggattagtgggcgtggtcctccggtt
tgtgggtcctgttaccatagtacccgccatcctgctgatcggaatttacatgacaagagccgctgtcaagttcattgagg
tccattggggaataggcatattaacagctggtctgtccatcttgttctccctgtacctggcgagatggaagcttccaata
cccgtatggaccaaaaagagaggatgtcacgtgatcaaatatcccttacatcaagtattctcaatcttgatagccatgat
gattgggtggggagtcagtggcattctgaccgccacaggaaatctgacctctgaccccgataatatacagtacagagcgc
ggacggacatcggacatgacgtcatcaccaacgcaagttggttttacttcccttatccaggtcagtttggtgctcctgac
ttcaacgttagtgtattgtttggcttcttgatagccactctcatctccatcctggattccataggggattactacgcatg
tgccaaaacttgccgcgtgccaccacctcccaatcacgccattaacaggggcatagccatcgagggaatctgtacgttct
tttctgggattgtgggatgtggtcacgctacgtccacctacgggggcaatgtaggagctattgggatcaccaaggttggc
agcagacaagtattcgtcctggtagcagttatttatatcgtctttggaattgtcggaaagttttctgcagtgttcatcac
cattccgcacccggtgttgggcggggccttgatcacgatgtttgggatgtttataggagtcgttctgtccaaccttcagt
atgtctgtctcaagtccaccagaaatatcgccattatcggcatatctatattggtaggactcgtggtgccgtactgggtg
gaattacgcccggatgttacatttacaggtgatgatgataaggaccgaattataagaacaattctaggtaatgccaatct
gacgggggcggtgctagcttgtttccttgacaacacgttgccaggtacaaaagaggagcggggtattgcatcgtggcaaa
caccggcacccgccgatatctccaataatagagacgaagacgttgttatatatgatcctattttcccaaaaagatggcgg
catagttctatactcaaatatataccgtttctgccaaatccggattctactggtgccaggaaaagaaggaatcgtaaatc
cctagattccacacgtttatga

Protein
Protein IDpfu_aug2.0_1263.1_11547.t1
Definition-
>pfu_aug2.0_1263.1_11547.t1
LEGSLMLAGGIHFLIGATGLVGVVLRFVGPVTIVPAILLIGIYMTRAAVKFIEVHWGIGILTAGLSILFSLYLARWKLPI
PVWTKKRGCHVIKYPLHQVFSILIAMMIGWGVSGILTATGNLTSDPDNIQYRARTDIGHDVITNASWFYFPYPGQFGAPD
FNVSVLFGFLIATLISILDSIGDYYACAKTCRVPPPPNHAINRGIAIEGICTFFSGIVGCGHATSTYGGNVGAIGITKVG
SRQVFVLVAVIYIVFGIVGKFSAVFITIPHPVLGGALITMFGMFIGVVLSNLQYVCLKSTRNIAIIGISILVGLVVPYWV
ELRPDVTFTGDDDKDRIIRTILGNANLTGAVLACFLDNTLPGTKEERGIASWQTPAPADISNNRDEDVVIYDPIFPKRWR
HSSILKYIPFLPNPDSTGARKRRNRKSLDSTRL

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495