Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_1263.1_11549
Locus scaffold1263.1 : 18808 ... 58445 : -
To GenomeBrowser scaffold1263.1:18808..58445
Genes list of scaffold scaffold1263.1
Synonym pfu_aug1.0_7764.1_60292

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_1263.1_11549.t1 gi|676433299|ref|XP_009046855.1| hypothetical protein LOTGIDRAFT_237968 [Lottia gigantea] 3.0e-33
pfu_aug2.0_1263.1_11549.t1 gi|513019815|ref|XP_004871201.1| 8.0e-30
pfu_aug2.0_1263.1_11549.t1 gi|512820005|ref|XP_004879242.1| 9.0e-30
pfu_aug2.0_1263.1_11549.t1 gi|591387469|ref|XP_007068150.1| PREDICTED: GON-4-like protein [Chelonia mydas] 6.0e-28
pfu_aug2.0_1263.1_11549.t1 gi|558203690|ref|XP_006132108.1| PREDICTED: LOW QUALITY PROTEIN: GON-4-like protein [Pelodiscus sinensis] 7.0e-28

Transcript
Transcript IDpfu_aug2.0_1263.1_11549.t1
Definition-
>pfu_aug2.0_1263.1_11549.t1
atgaggatgatgatgcaagtgataacgaacgaggatgtggttgccatggtgaggaacacactaatgaaggatcaggggga
ggagatagaacctggtcaagctgtatatgaaccgaagatgaccaggtcaaaggtcaaacaaacaatagaggaaaatggac
aggtccttcatccatggcccctgactcctttgaagaagaagcagcagaaaaagacgtttctggacatggaacttacagat
tccgaggctgattctgatgcagactttgatcccacgctacaaccatcaagcctgagtgacgaggatagtgaaagcttggc
ttcttcacacttgagtgaatttggatccccctcaacccctgcaactcctagatccaccgctgcgtcagtgtcagatcttg
ataaaactcccagtatcagaggagagggagatcaggtaatactgagtccaatggggccccctagcacgccctttgctcat
aagaagtcacttggaagaaaatttcaagaagcaatggcagaaaatgacagagtacaggaggtcaccaagaaagatcgaga
aaaagatgagatgagaaatgatagaggagttcaagtttccaagaaggagatgaaccagttaatggatgaactcttccagt
tttacgaggaaactgctgattgggaggaggaggataatgaagatgtgaagcggaatgtgaccgttaccaagaatcaattg
aagaagaagtggtcagagactgggtacgattcgacttctgaggatctaactaacatcatgtgtacgtcacagagacaaca
actagctgatcagatgagaaagcatgtccagttacttacacagacgttcatattagctagtggaaacccagatcagtact
gtactatagctaaatcaagtcaagttcttctgaatgagctgcataccttcaaagtccagaactctacttttatgacgtca
aattcagcttactgtgctagtaacctagacgatgccacagagttggtcaatgaagatcgagaatgggactcgacgttaag
tcagaaaaagaaaaacaaggccgtgaagaatccgcagagatctattgcctctacattgatgcagaattacagccagctgt
ccaggtttcagaaagataaaatcttggaaattgttgaagacccatcttccaagtccagatttgatcctaatcttgccaaa
gtactaccagagttatccccccagcagaaagatttgatatggaaatcctcggtctttatttatcctgaactgctacctag
tttttcttacctacgtcaaaaagcagctccgcagagagtggtgttcacagaatctgaagataatctaattgctctggggt
tggaacagtttagtgcttttccattgtacaagaacttaatacaaaagttcttgttacctgttaaaacaccagaacagatc
aagatcaggataaagaacttagcctgtgcaaaagccacagataatgctgtgaagttctacaagacgaagaagagattgcc
tccctttccacgttttaccntatgtactttcaccaagcttgcaggaatttatggaggagaaaaatccaattctgctcccg
ccactcctctcactcagtcatcatctataggaattcggccaacccccggtttagctgctcgtaaactgatcacagacaca
ccgtcatgcttgttctctagtccagtgatttacacgccaatcaaaactcctgttcagactccagacatactagtcactcc
cgcatgtcaaaattctgaccaaaacttgtcaaaaaagatgtctgccgatgctcaagataccaagagctcatcacggacaa
gtttgaattttggagatgatttgccaccattggtgtctgccgtttctaatccgtctaaaaactgtgtgagtgttaatgaa
gtggaaggctcgctacttaacttggaagattttatgcccgatgtttgtgatgaaaataatcatagtaaacaagctacaat
aagtatggatataaaaggttcaaaggaaacatcttgtgaaagtacagcagaggaagtaagatctcaaaaagattcagtaa
ccaaggaaaaggaaaatttttcaaatacatgtgagaccgatcattctactagcaattcaatcactataatcccaaatcag
actgttcattctaatactgatccacttgatacaaatgctagtcaggaagttcattcctttagtgcttcacctactacaac
cagctctcctgttaagaatgttttatcactgacacagtcaggttctaagttaataatgagtatagccgagagtgacagac
atatggacagtcagagttccattgtcgtatgtgacgataataagatagtagacagtcctgctgctcctccctcccatata
attgcacaatcagaggatgcacaaagaaacattgaaccatgtgacggaacagaatctcaagaaatcaaaaattcagacga
tctcaatatgtcaaatgatgaatcagcagtggcctcccctgcttgtgcagctgatacatctatgactggtgtcagagcaa
ccaatagcacaataaacccagttgctgacagtgagattttacatgataaagtgatgcaaagcaattcagctgtttgtctg
acaaaaggggccactatagtgccatcagaagtcaagcttcctgcgttagataacattccacctgtaaaatctgcattgga
gattgttgcatcatatgctaaatatatggtttctccaacgaaaaatgttaccttatgtcagaggagtcaagaaacgaccc
cgaagaagaaaacaccaacaagataccacccattagcacctaagcctattacttcccctatccgtccagtacgacctatt
tttgagaaaaagagtcctcgtagacaacaattacagcggaaagcgcaggccatttgtccgaaaggtctagttgtgaaaac
cgcaatatcgccgtctaaaaaggctgcagatatcatcatgaacaaagttctcagaaggggaaataggcggattttanaag
tcaagcttcctgcgttagataacattccacctgtaaaatctgcattggagattgttgcatcatatgctaaatatatggtt
tctccaacgaaaaatgttaccttatgtcagaggagtcaagaaacaaccccgaagaagaaaacaccaacaagataccgccc
attagcacctaagcctattacttcccctatccgtccagtacgacctatttttgagaaaaagagtcctcgtagacaacaat
tacagcggaaagcgcaggccatttgtccgaaaggtctagttgtgaaaaccgcaatatcgccgtctaaaaaggctgcagat
atcatcatgaacaaagttctcagaaggggaaataggcggattttgcccaagcccccacacatgcccagcccacagttaac
gatacgtaccaggagctcatctagacggcaattagagatgaccaatcatgagacagatgaagagaatatggaaaccaata
gtgaatgtgatacaggtagaaatattatctctcaggctgatgatagagacacatcctttgctcaagcttatttagccatg
gccagagatacactgaagaatgacctgggtgtttatgaacaatttctacgagttctgtgtgagcttgggaaaggagaaca
gtcacctgttaagatatattttgagaagaaccccagtaactaccagaaggttataaagatcctatcacggtggtctcaac
ataaagtgagggatccaggggagctgagggaggctatagaacccctgtttaagtcccagccacacctgatggaacagttc
tctctgttctttgtcgatgcaagacccccggagagtatgatgacagagtttgaggagataaagtttgatgacagtgatga
ggacattgaggaccttcctcatgatggctttgaggacttagttctccctgaggaagaggaacctaatggcaccaagaagt
gtagatgtagttgccataacaacccgaggcttatcaacttctataaaaggaacaaacactgttactcatgctgtctgaag
gtaataaatggagagttatactacaaaatcaacaagcaggtcatacgccgtgtgaaggttacacggcatacagctattaa
agccaagggaaataatccagaatctgagaatgatatatcggtaccgtcacggctggttgagcagtcacagccaatcgagc
aggaaaccgttgcatggatggacgaggatgaggcgatagcggagaaggaaaatgttaatgtattacccaagaccaaatca
aaacagtttggaatcaagcttaaaatttcttcaaagaagaagggaaagcagaaaagattttactctctcaaagagatgac
tgaatcccctgtgaaacaagagataccatcatgtagtatggatggatttagcggtaatgaatctacacagcatgcaccag
agactgctcttcacacagtgacaaatagtgacgcaaacaaaatcctcgctagtcaagataaacgttccacgcctcctgga
gctggtaatgatgtgttgtctgcatgtaataatccctgtgatagtgatggaacagcaaaagccttacaagaggccatgat
tagtcagaacgatgtaacgttagatggtagtctcctttgtcaacctttaatgaatagtcccgagaaattaactgctcaga
tttcaactgttgtcgaagtaagagaaactagggaaaaagacgttagaatgaatgaagggagtagtgcttatagtgaagtg
tttaaaacaaaccagagtgatatacccaatttcaccgtgtcagacagtataaaagataaacatgcttccacatctgaagt
tccgcaaagctttgttgatgatggattgaagcagagaaatgaaacaagtccatccgattctgacaaaatagttgtttcaa
attcagccagttcttcaagtgaaaaaagaagaatagttcccattccagtccctgaagataaactctgtatgtctccggcc
ttcatggttccatctaatgaggacacttctagtgtacatagtataaaaagtcccgcctcctctggtcccattataactta
tacaaactcgcccatgtttcattcagattcttcttctgaaaatgtaattaaaagttcaaatcagtcacagaaactaccac
aaaaaccggtgttcagtccaccaagtcagcccattagtactgctgcacttagaaggagatgtccaatagacggcaagtcg
aatgacggtactagcgaggaaagaaaagtgggcaaagatgaatctgcttctaaaggagctccaagtccttgcccaagttc
taaccaatcgtggtgctcagataggactatcatatcaagtgttatagggtttggcagcgaggcttctaacactagcacac
attctttggagggaagggtctctagtgatagaggaaatggcaaagttgcagagaagaattcaaaagactcagagagtgca
gaaatagcatggaccagggaccatgataagttgattttagagacagttaagaagcttggaccagggtctgctacgtttga
tgcaatatccaaggatttacctggacggtcagctgctcaggtactcggtaggttccatcacctacttgagatgctggcag
aggaagacacaccaagtgaaggtgaaacatcaggaactagctccagctaa

Protein
Protein IDpfu_aug2.0_1263.1_11549.t1
Definition-
>pfu_aug2.0_1263.1_11549.t1
MRMMMQVITNEDVVAMVRNTLMKDQGEEIEPGQAVYEPKMTRSKVKQTIEENGQVLHPWPLTPLKKKQQKKTFLDMELTD
SEADSDADFDPTLQPSSLSDEDSESLASSHLSEFGSPSTPATPRSTAASVSDLDKTPSIRGEGDQVILSPMGPPSTPFAH
KKSLGRKFQEAMAENDRVQEVTKKDREKDEMRNDRGVQVSKKEMNQLMDELFQFYEETADWEEEDNEDVKRNVTVTKNQL
KKKWSETGYDSTSEDLTNIMCTSQRQQLADQMRKHVQLLTQTFILASGNPDQYCTIAKSSQVLLNELHTFKVQNSTFMTS
NSAYCASNLDDATELVNEDREWDSTLSQKKKNKAVKNPQRSIASTLMQNYSQLSRFQKDKILEIVEDPSSKSRFDPNLAK
VLPELSPQQKDLIWKSSVFIYPELLPSFSYLRQKAAPQRVVFTESEDNLIALGLEQFSAFPLYKNLIQKFLLPVKTPEQI
KIRIKNLACAKATDNAVKFYKTKKRLPPFPRFTXCTFTKLAGIYGGEKSNSAPATPLTQSSSIGIRPTPGLAARKLITDT
PSCLFSSPVIYTPIKTPVQTPDILVTPACQNSDQNLSKKMSADAQDTKSSSRTSLNFGDDLPPLVSAVSNPSKNCVSVNE
VEGSLLNLEDFMPDVCDENNHSKQATISMDIKGSKETSCESTAEEVRSQKDSVTKEKENFSNTCETDHSTSNSITIIPNQ
TVHSNTDPLDTNASQEVHSFSASPTTTSSPVKNVLSLTQSGSKLIMSIAESDRHMDSQSSIVVCDDNKIVDSPAAPPSHI
IAQSEDAQRNIEPCDGTESQEIKNSDDLNMSNDESAVASPACAADTSMTGVRATNSTINPVADSEILHDKVMQSNSAVCL
TKGATIVPSEVKLPALDNIPPVKSALEIVASYAKYMVSPTKNVTLCQRSQETTPKKKTPTRYHPLAPKPITSPIRPVRPI
FEKKSPRRQQLQRKAQAICPKGLVVKTAISPSKKAADIIMNKVLRRGNRRILXVKLPALDNIPPVKSALEIVASYAKYMV
SPTKNVTLCQRSQETTPKKKTPTRYRPLAPKPITSPIRPVRPIFEKKSPRRQQLQRKAQAICPKGLVVKTAISPSKKAAD
IIMNKVLRRGNRRILPKPPHMPSPQLTIRTRSSSRRQLEMTNHETDEENMETNSECDTGRNIISQADDRDTSFAQAYLAM
ARDTLKNDLGVYEQFLRVLCELGKGEQSPVKIYFEKNPSNYQKVIKILSRWSQHKVRDPGELREAIEPLFKSQPHLMEQF
SLFFVDARPPESMMTEFEEIKFDDSDEDIEDLPHDGFEDLVLPEEEEPNGTKKCRCSCHNNPRLINFYKRNKHCYSCCLK
VINGELYYKINKQVIRRVKVTRHTAIKAKGNNPESENDISVPSRLVEQSQPIEQETVAWMDEDEAIAEKENVNVLPKTKS
KQFGIKLKISSKKKGKQKRFYSLKEMTESPVKQEIPSCSMDGFSGNESTQHAPETALHTVTNSDANKILASQDKRSTPPG
AGNDVLSACNNPCDSDGTAKALQEAMISQNDVTLDGSLLCQPLMNSPEKLTAQISTVVEVRETREKDVRMNEGSSAYSEV
FKTNQSDIPNFTVSDSIKDKHASTSEVPQSFVDDGLKQRNETSPSDSDKIVVSNSASSSSEKRRIVPIPVPEDKLCMSPA
FMVPSNEDTSSVHSIKSPASSGPIITYTNSPMFHSDSSSENVIKSSNQSQKLPQKPVFSPPSQPISTAALRRRCPIDGKS
NDGTSEERKVGKDESASKGAPSPCPSSNQSWCSDRTIISSVIGFGSEASNTSTHSLEGRVSSDRGNGKVAEKNSKDSESA
EIAWTRDHDKLILETVKKLGPGSATFDAISKDLPGRSAAQVLGRFHHLLEMLAEEDTPSEGETSGTSSS

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495