Gene
| Gene Model ID | pfu_aug2.0_1263.1_11554 |
|---|---|
| Locus | scaffold1263.1 : 123186 ... 134637 : + |
| To GenomeBrowser | scaffold1263.1:123186..134637 |
| Genes list of scaffold | scaffold1263.1 |
| Synonym | pfu_aug1.0_41390.1_41210 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1263.1_11554.t1 | 1 | 1 | TAP42 | 8 | 338 | 0.0 | 263.9 | 0.0 | 0.0 | 263.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1263.1_11554.t1 | gi|676458881|ref|XP_009055121.1| | hypothetical protein LOTGIDRAFT_232515 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1263.1_11554.t1 | gi|742201886|ref|XP_010893709.1| | PREDICTED: immunoglobulin-binding protein 1 [Esox lucius] | 0.0 |
| pfu_aug2.0_1263.1_11554.t1 | gi|512906680|ref|XP_004926257.1| | PREDICTED: immunoglobulin-binding protein 1 [Bombyx mori] | 0.0 |
| pfu_aug2.0_1263.1_11554.t1 | gi|390362688|ref|XP_785736.2| | PREDICTED: immunoglobulin-binding protein 1 isoform X1 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_1263.1_11554.t1 | gi|239985647|ref|NP_001140137.1| | immunoglobulin-binding protein 1 [Salmo salar] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1263.1_11554.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1263.1_11554.t1 atggcagaaagcacatcaaatttgacagacctttttgataccgtgtggaaatcatgggaaacgtgtgaaacaacagagga gccctctaattcatacacagtacagaaatgtttgttggttggattgaccagcggtgagaaggcaatacgaatgataaatg acctgtgtctgtttagtgataatgaagacttggatgaggtgccgtcatcagagttgaagtaccttttattaccagcattc atgggatacttcatgcaaagacgaacagtcaaagatccaatggacagagaagaaatagcaaagaaatctatagtttatct caaagattttcttaggaactgtgaaagttatagtattgcaaaaataaaccaaaaacttttagaggatgaagagtcaggca aggaaaaccagcaaatatcagtccccggccctccaggtctccagaatcagatcaggaccagggaggagaaaattaaaagc ttcaaagagaagaaagaacttgatgctagaataaaagaacttcatgaacatatgcagaaagaccatgtagatgatgaagt aaagagggattattacacaagtctactaaaacagtgggttaattcatctatagaggatgtagaatctttacaagttgaat tagagatgttaaaaatgagacggaatgccatagacgatccgaaagaggaggaaactcagcaacccaaaccaaaggctccc atccgtccatttatcattaccaaggatatgattcagaagtcagtgtttggtgcaggttacccaagcattccaactgtcac tatagaagaatttttcgaacaaaaagtcaaggaaggttcgatccagatgcctggaccttcaggtcacagtatgcaggact gggcagccaacccagagaaagacaaagaagatagagagaaggaagaagaagaaaaagagagaaagattgaagaagatgat ccagaaacattgcagaaggcaagaaattgggacgactggaaagatgatcacagaagaggttggggcaatcgtcagaatat gggatga |
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Protein
| Protein ID | pfu_aug2.0_1263.1_11554.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1263.1_11554.t1 MAESTSNLTDLFDTVWKSWETCETTEEPSNSYTVQKCLLVGLTSGEKAIRMINDLCLFSDNEDLDEVPSSELKYLLLPAF MGYFMQRRTVKDPMDREEIAKKSIVYLKDFLRNCESYSIAKINQKLLEDEESGKENQQISVPGPPGLQNQIRTREEKIKS FKEKKELDARIKELHEHMQKDHVDDEVKRDYYTSLLKQWVNSSIEDVESLQVELEMLKMRRNAIDDPKEEETQQPKPKAP IRPFIITKDMIQKSVFGAGYPSIPTVTIEEFFEQKVKEGSIQMPGPSGHSMQDWAANPEKDKEDREKEEEEKERKIEEDD PETLQKARNWDDWKDDHRRGWGNRQNMG |
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