Gene
| Gene Model ID | pfu_aug2.0_1263.1_11558 |
|---|---|
| Locus | scaffold1263.1 : 155046 ... 166070 : + |
| To GenomeBrowser | scaffold1263.1:155046..166070 |
| Genes list of scaffold | scaffold1263.1 |
| Synonym | pfu_aug1.0_2150.1_22880 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1263.1_11558.t1 | 3 | 1 | WD40 | 153 | 175 | 5.1e-14 | 51.5 | 0.00011 | 0.54 | 10.2 |
| pfu_aug2.0_1263.1_11558.t1 | 3 | 2 | WD40 | 198 | 229 | 5.1e-14 | 51.5 | 5.0e-08 | 0.00025 | 20.8 |
| pfu_aug2.0_1263.1_11558.t1 | 3 | 3 | WD40 | 281 | 308 | 5.1e-14 | 51.5 | 6.4e-07 | 0.0032 | 17.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1263.1_11558.t1 | gi|676438780|ref|XP_009048642.1| | hypothetical protein LOTGIDRAFT_83319, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1263.1_11558.t1 | gi|115678853|ref|XP_795417.2| | PREDICTED: F-box/WD repeat-containing protein 9 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_1263.1_11558.t1 | gi|558199083|ref|XP_006105076.1| | PREDICTED: LOW QUALITY PROTEIN: F-box/WD repeat-containing protein 9 [Myotis lucifugus] | 0.0 |
| pfu_aug2.0_1263.1_11558.t1 | gi|632977406|ref|XP_007905325.1| | PREDICTED: F-box/WD repeat-containing protein 9 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_1263.1_11558.t1 | gi|562865735|ref|XP_006161051.1| | PREDICTED: F-box/WD repeat-containing protein 9 isoform X1 [Tupaia chinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1263.1_11558.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1263.1_11558.t1 atggcagaagcctcgtccaacaccaattcatcaaaatctgatggaaaaggtacaagatcaagttatcctccccgtgactc tctatcccaggatgaataccaggatgtcccagaacctaacaacacagaggaagattatgaggaggatgaccccctgacct tagacaccctccctgtagaactactgatgtatatatctaacttcttagatgccaagtttctaattcatacactgagtaag gtctgccaagtgttccatgatctactaaccagagatatctactggaagaccaggatcagtaaaagatggccaaaaccata tcctcctgtatacgatgagaaattcagttggcaggaggcatgtataatgagagaggaacaacacaaaatgtggaccaacc aggaggagttatgtcatcatttgaagtacagagagggaatatttgctcctgttgatgctgtacatctgatgaagaatggt agatttttggtgtcaggatcccgggaccgttacttgaacgtagtggacctgtccaagtatgatccagagaattcatcttc cattaaacagatgaaagtctactcttatgataaagctcacaagggctggatatggtcggtggcctccaacagtgacgaca gtaggatgtgtacaggatcatgggatacctacattaaaacatgggatgtatggaacgattgtacagaaataaataattac aaatgtagatcagctgtgttgagtcttcacatggaagagaacaccgtgattggtgcaggttatgaccaacaaatctacac catcgacaccaggaccaatgacgtacacaggaagaagtaccatagacggcctgtgctaagtctgaaagccgatgataagt acgtaatcagtggtagtgaagacaagacggtgtctatatttgacagacgggcaggccatgtttacaaaactatacagatg gaaagttatgccatggacctgtcgtttggccaccagcagctatggatctcagataaggagggcaaaattcacttgtatga tgctactttaggacaatttgaattcatacagacatatgatgtaggccatacagggaaggctacntcaatataa |
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Protein
| Protein ID | pfu_aug2.0_1263.1_11558.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1263.1_11558.t1 MAEASSNTNSSKSDGKGTRSSYPPRDSLSQDEYQDVPEPNNTEEDYEEDDPLTLDTLPVELLMYISNFLDAKFLIHTLSK VCQVFHDLLTRDIYWKTRISKRWPKPYPPVYDEKFSWQEACIMREEQHKMWTNQEELCHHLKYREGIFAPVDAVHLMKNG RFLVSGSRDRYLNVVDLSKYDPENSSSIKQMKVYSYDKAHKGWIWSVASNSDDSRMCTGSWDTYIKTWDVWNDCTEINNY KCRSAVLSLHMEENTVIGAGYDQQIYTIDTRTNDVHRKKYHRRPVLSLKADDKYVISGSEDKTVSIFDRRAGHVYKTIQM ESYAMDLSFGHQQLWISDKEGKIHLYDATLGQFEFIQTYDVGHTGKAXSI |
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