Gene
| Gene Model ID | pfu_aug2.0_1267.1_24820 |
|---|---|
| Locus | scaffold1267.1 : 28859 ... 34305 : - |
| To GenomeBrowser | scaffold1267.1:28859..34305 |
| Genes list of scaffold | scaffold1267.1 |
| Synonym | pfu_aug1.0_10248.1_17598 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1267.1_24820.t1 | 5 | 1 | zf-C2H2_jaz | 302 | 315 | 4.2e-08 | 33.1 | 9.2 | 12000.0 | -3.5 |
| pfu_aug2.0_1267.1_24820.t1 | 5 | 1 | zf-C2H2 | 538 | 560 | 2.4e-11 | 43.2 | 0.00016 | 0.21 | 11.9 |
| pfu_aug2.0_1267.1_24820.t1 | 5 | 1 | zf-C2H2_4 | 538 | 560 | 2.2e-09 | 36.9 | 0.00066 | 0.88 | 10.0 |
| pfu_aug2.0_1267.1_24820.t1 | 5 | 2 | zf-C2H2 | 571 | 594 | 2.4e-11 | 43.2 | 7.0e-05 | 0.094 | 13.1 |
| pfu_aug2.0_1267.1_24820.t1 | 5 | 2 | zf-C2H2_4 | 571 | 591 | 2.2e-09 | 36.9 | 8.6e-06 | 0.012 | 15.9 |
| pfu_aug2.0_1267.1_24820.t1 | 5 | 2 | zf-C2H2_jaz | 571 | 593 | 4.2e-08 | 33.1 | 1.6e-06 | 0.0022 | 18.1 |
| pfu_aug2.0_1267.1_24820.t1 | 4 | 1 | zf-met | 571 | 593 | 3.4e-07 | 30.2 | 6.6e-09 | 8.9e-06 | 25.7 |
| pfu_aug2.0_1267.1_24820.t1 | 5 | 3 | zf-C2H2 | 600 | 622 | 2.4e-11 | 43.2 | 0.019 | 25.0 | 5.4 |
| pfu_aug2.0_1267.1_24820.t1 | 5 | 3 | zf-C2H2_jaz | 600 | 619 | 4.2e-08 | 33.1 | 7.1e-06 | 0.0096 | 16.0 |
| pfu_aug2.0_1267.1_24820.t1 | 4 | 2 | zf-met | 600 | 618 | 3.4e-07 | 30.2 | 0.016 | 21.0 | 5.4 |
| pfu_aug2.0_1267.1_24820.t1 | 5 | 3 | zf-C2H2_4 | 601 | 621 | 2.2e-09 | 36.9 | 0.35 | 470.0 | 1.5 |
| pfu_aug2.0_1267.1_24820.t1 | 5 | 4 | zf-C2H2_jaz | 639 | 659 | 4.2e-08 | 33.1 | 0.0015 | 2.0 | 8.6 |
| pfu_aug2.0_1267.1_24820.t1 | 5 | 4 | zf-C2H2 | 640 | 662 | 2.4e-11 | 43.2 | 8.0e-05 | 0.11 | 12.9 |
| pfu_aug2.0_1267.1_24820.t1 | 5 | 4 | zf-C2H2_4 | 640 | 662 | 2.2e-09 | 36.9 | 0.00044 | 0.6 | 10.5 |
| pfu_aug2.0_1267.1_24820.t1 | 4 | 3 | zf-met | 640 | 658 | 3.4e-07 | 30.2 | 0.0039 | 5.3 | 7.3 |
| pfu_aug2.0_1267.1_24820.t1 | 5 | 5 | zf-C2H2 | 667 | 686 | 2.4e-11 | 43.2 | 3.0e-06 | 0.0041 | 17.3 |
| pfu_aug2.0_1267.1_24820.t1 | 5 | 5 | zf-C2H2_4 | 667 | 686 | 2.2e-09 | 36.9 | 1.5e-05 | 0.02 | 15.1 |
| pfu_aug2.0_1267.1_24820.t1 | 5 | 5 | zf-C2H2_jaz | 667 | 686 | 4.2e-08 | 33.1 | 0.00035 | 0.47 | 10.6 |
| pfu_aug2.0_1267.1_24820.t1 | 4 | 4 | zf-met | 667 | 686 | 3.4e-07 | 30.2 | 0.24 | 330.0 | 1.6 |
Transcript
| Transcript ID | pfu_aug2.0_1267.1_24820.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1267.1_24820.t1 atgacagttgaagaaggagaccctaaaatactgtcagctttgactctgaaatcaactaaatcagcaaaatctactcctgt agcatctccatcaccagtgagcaggtcaaggcgccagataaaggtcaataggaaatatgcagattatgaggtcactccat taagagtgaagaaagaaataaaggaggaaccagaagacagtcaggaagaagatggagcttcctcacaagaaagtatggaa caagcctctccgaagaaggaaaccagaggtagaaaaaggaaggtaccagatagagatgatgcagaccaagcaaaagggaa agataaaacaaaagggtttgctagtccatcaacaaggcagagacaaaggagagatagtgatgctgatgatagtgcaaatg agtctaatgctaaaagaaggaaagggaaagatggtggagagagcagtgatgaaagtaaaactagagcaaaaaaaggaaaa caaactactactgaagagaaaaaagagaaagctgcgaacagaagtcccaggagaatgagtccaagagctcagcgagaaga agcaccagaggaagatgatgttgaaatcacagaaggaggtgctgaaggcgatgaagaggaggaggaggaaaatgaagatg atgatgaggcagatgatgagatacgtgataaaccgaaagtgaaaatgactaaacgtgaaattgattcatttactgatcct tataaacgcaaaagaggaagaccaaagaaaagtgagtctgaatttcaaaggaaacaaagtgaaacacctcataaaatcac ggaaaaacgtaaatgtgggaaacccaaaaggtatgctatagaggaagaagctgaattggatgaggatgatgaggaatttg gagaggaagatggctctgagaaaaatttgaaaaaagacaagcatgaaaagcaaaggaaatatcaaaaggataaagatcag gaagaggaagacggggattttgatgaacaaaatgaaaacaacgaagcaaaaggaaaacctccacctattaaaaaagagat tgaaagggaaaattcagaagaaggtgaggagaataatgatacaaaggatgaaaacacttctatcaacaagaggagacgaa gcaaacctgaaaggatgaagggaggaaatgttatttatttcccatcagataaagagatggaacatgataatgatttggat aaagattggtatccagcaggtgatgatgatgatgatgatgaaccgggagaagattatgaaactatcagtgatgaggaaaa aacggaagaaaaggaattcaaaactaaagatcagggaacatctactccatgtgcagatccaaaattcttcaaaagaagac gaggtagacctaggaaaaatgaggtagatgacatcatctactatccacccaaaaggaagactacgtctgttgatgggatg gaggtagattggtatccagacggtgggggagtacccggagaggaggtaccgaagaagaaaagtaacagaggtaggaagaa gaagaatcgggcaccgctagacccggacagatataggataacatctgatgatctgcaggaagcatttagaaatggcgaag aaaagggtgaatttatatgtagagaatgcggagaaaattatacttggaagcggtcatacatgcgacatttagaagcccat gtgcaagtgaatgaagggaaggacacaatttatgactgtaaagtatgcaataagaagtttgtatctgaatgggaaatgaa gaatcatttgagaggaaaacataaaatgctgttcgtttttgattgtgacacatgtcccagaaagttccatacagccattc agtttaaaaatcacaaggtcaactgtacgaaggaaaatcccaacacagatccgatagaggatgaccccttacagaagttt acatgtaattattgcttgatgaagtttaaatcacaacaccagctggatactcacaaggagcttcataatattgtagagta tagatgtgaggaatgtggtaaagtatttccagaggcatacagattgaaaaaccatgagcaggacacagatggagtgacag agactgtttatgtcacagctctgacggagggacaggaagatggcacccagtccatacagtatgccatgccgcagggatcc gaccaacaaatgctagaatttgttgtcataaactacccatcagaaaactccaacgaagttggaataacaactacagaggt gggcatgccttctacagaggaggagaacgatgtggtacaatccatactgaacttacaggatggcatcatagccgacacaa gtaccgctgttatagctcagccaccagagcctgctcagtag |
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Protein
| Protein ID | pfu_aug2.0_1267.1_24820.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1267.1_24820.t1 MTVEEGDPKILSALTLKSTKSAKSTPVASPSPVSRSRRQIKVNRKYADYEVTPLRVKKEIKEEPEDSQEEDGASSQESME QASPKKETRGRKRKVPDRDDADQAKGKDKTKGFASPSTRQRQRRDSDADDSANESNAKRRKGKDGGESSDESKTRAKKGK QTTTEEKKEKAANRSPRRMSPRAQREEAPEEDDVEITEGGAEGDEEEEEENEDDDEADDEIRDKPKVKMTKREIDSFTDP YKRKRGRPKKSESEFQRKQSETPHKITEKRKCGKPKRYAIEEEAELDEDDEEFGEEDGSEKNLKKDKHEKQRKYQKDKDQ EEEDGDFDEQNENNEAKGKPPPIKKEIERENSEEGEENNDTKDENTSINKRRRSKPERMKGGNVIYFPSDKEMEHDNDLD KDWYPAGDDDDDDEPGEDYETISDEEKTEEKEFKTKDQGTSTPCADPKFFKRRRGRPRKNEVDDIIYYPPKRKTTSVDGM EVDWYPDGGGVPGEEVPKKKSNRGRKKKNRAPLDPDRYRITSDDLQEAFRNGEEKGEFICRECGENYTWKRSYMRHLEAH VQVNEGKDTIYDCKVCNKKFVSEWEMKNHLRGKHKMLFVFDCDTCPRKFHTAIQFKNHKVNCTKENPNTDPIEDDPLQKF TCNYCLMKFKSQHQLDTHKELHNIVEYRCEECGKVFPEAYRLKNHEQDTDGVTETVYVTALTEGQEDGTQSIQYAMPQGS DQQMLEFVVINYPSENSNEVGITTTEVGMPSTEEENDVVQSILNLQDGIIADTSTAVIAQPPEPAQ |
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