Gene
| Gene Model ID | pfu_aug2.0_1267.1_24822 |
|---|---|
| Locus | scaffold1267.1 : 48636 ... 81275 : - |
| To GenomeBrowser | scaffold1267.1:48636..81275 |
| Genes list of scaffold | scaffold1267.1 |
| Synonym | pfu_aug1.0_9822.1_02821 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| protein transport protein sec16a | GO:0009987 GO:0044444 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1267.1_24822.t1 | 1 | 1 | Sec16 | 910 | 1012 | 2.3e-21 | 75.9 | 9.2e-25 | 6.8e-21 | 74.4 |
| pfu_aug2.0_1267.1_24822.t1 | 2 | 1 | Sec16_C | 1082 | 1212 | 5.6e-27 | 95.2 | 5.8e-26 | 4.3e-22 | 79.1 |
| pfu_aug2.0_1267.1_24822.t1 | 2 | 2 | Sec16_C | 1223 | 1257 | 5.6e-27 | 95.2 | 4.4e-06 | 0.032 | 13.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1267.1_24822.t1 | gi|676444217|ref|XP_009050357.1| | hypothetical protein LOTGIDRAFT_231137 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1267.1_24822.t1 | gi|524864018|ref|XP_005088847.1| | PREDICTED: uncharacterized protein LOC101850917 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1267.1_24822.t1 | gi|573905941|ref|XP_006640691.1| | PREDICTED: protein transport protein Sec16A-like [Lepisosteus oculatus] | 0.0 |
| pfu_aug2.0_1267.1_24822.t1 | gi|655903117|ref|XP_008252335.1| | PREDICTED: protein transport protein Sec16A-like, partial [Oryctolagus cuniculus] | 0.0 |
| pfu_aug2.0_1267.1_24822.t1 | gi|39104615|dbj|BAC65524.3| | mKIAA0310 protein [Mus musculus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1267.1_24822.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1267.1_24822.t1 atgagccagccagctccctggagctaccagggtaccaaccctggacacgacactggccaagtcaagatgtttgatccctc caatactgtttctgaccctggtcaagtcaaaatgtttgatccatcacagatgcaaggttcaaatcaacccagtgttccat tgtataatggccagccagagaattcagctgatcatggtcagggtcaaggttacttttctcaaggtcaggaacaaaatgga acttctgagcaacaaaattaccaaggacaatattatcaatatggcaatggacaaatgcagtatgggtatgatcagactca gaatatggatgcaaatcaacaatattataatcctgggcaatactgggatcccaatcaacagtggcagaattataatcaac agtcatatgagcagtatcaaggtcaaggtcaacaatggacaaatcaagaatatgacccttctggaggaaattctcttaat gtgcatgccgaacagtttgtgccaaataattatcaacaggcgggatatgatgctagtcaaggtcaaggtcatataaatca ggaacaaataggtcaaggttatggagaagatgatagtttagatcagtcacatgcgtcggtcacatctgagagtagtacaa gttatagtcaatctaatgacacttcaggacttggtggatttttccacggtgatagtgtatcagattcttgtgggactagt atgaatagtggagtattcgacgataaaagtaaagcgcaggagcataaagatagtgaacaagagcatatacaatctgaatt tagtaatgaaagtttacgtactgtgaattattcatcggcatcgcttccagtttcacaacaaggtgatgaaattaatgcca taacttcccaagtgcaagaaatttctctgacaacagataccgagaatcataacgtatctagtgtacaagataatgtgata caaaccttctcctccaaccagccagtttctcattacaaccaacagcccagtgcacctcatcaagagggcgtgtctacagg cgtaccagaaacatcgtcagggggaagtcagaattctgaggggctgagtgactgggaggttgtcccccctcagacactgt ccgtacctggacatcagagtagagagggctctacacatagattaccaccaatgccacctagaggaggccctcctaaaggt tcaggggaggatgctggtaatccattcaggagagacaagggaaaggtgacaaactacaccataccccctacacaggggca atcgtttactccgcatagtgcaccacaggatatgaaatcaaacgaaaaattgacacttgatgtgagtgctacagaatctg gtataccaagtcctatcatgtcaagttcagaggagactgttacagtctctcatccaaacacgccccctgtggcaccaaaa agctcccagagtcctatactacccaggaaggaaagcccatttcaaccaccgtcacgaagaagaacactgtctgggcagtc aagtggatctatagaggagaagcctcagttagagagccagttgtcaaatgaagggggatcaaagcaagaaaaagtgatag aaactcgagagaaaagtgcaagcatttctagtcagtcatcaaggggttcatcaggtaaaggggaacctgccaaatctggt gacaagactcagtctgatagagagagggaactaagtaaataccaggagaggataaagaaggcaagcaggcccccacccgg ccctcctcggggagtgatgtctcccagacggattgagtccgcttttcagcaagtacagaaacagcgagccaaacataaca tgtctccggccacgagtctctgggcagctccagctagtgggactgggtcaagtgtgtcctcggccaaaacttcaccagca aagtcaacaaaggaaacaacaagggatgtgttgtcgcccgtacaaatgttgataacgagcctgagtgaaaaacagtctaa agaatctacgccagaaaggagcatgactgccagtgataaaggatcgaggaagccagatgcctcaagaccaacagataaaa gatatgatgtaggaagagatagacgagagactagacgtgatatttcaccttcaagagatcgtcatgaccgtggatcatca attgatagggaattggaaataagtcgcaaaatagaagacagagatttaagaaaggatagagatgattattatagagatcg agagagggattactacagggatgacagatatagaggaagggattcgagaggtcccagagatccccgggacagagatccta gagatcgagatcctagggacagagattatgacccataccaagatagacgatacagagatcgtggttactatggcgatgag agatatgataggccaaggtcgcgacattccctgttggatgaggagaggtcatcttccaggcaaggctcggagtctgagcg acccagatctaggcaagattctgacagaccaagatcacgacaagaatacggcagagattattattatagagataaatatg gaagagataccctggtcaatataatgatcgatatggacctccgtatgaggaaggttacagacaaagtcagagaggtggat cccgggtacacacccctggatcactgtctgatactggggatcagccaagtacgaccagggcggatgaccccagccaaaca ttccatacctcacctgtgtgtccggtttggtcccggtggacagctggtcaaggtcttaccaaaccggccagctgatgggg aacctgccacagtggaaatacacgacatctctcaggtgttgcaggataacctagaaactgatgagctcaagtcctttcct gggcctcttgttagaggtgacacacataagaatgatgtgttggtgttctgtcagcgtaaagctaaggaatgtctggataa tgtacagatgatggacagagagtcggcagccttaatatggaaatatcttgaacttctcatcaaacaaaatgggacatgtg ttggaacagatgtggccgatctattgttagaaggtcatgaacctacgactgtagactatagcatgatgggattgagaata cagagtcaggataacttggatgaggaactgaatgaaaccacggaaaccaatttctccatggtaactgccgataggtctgt tataaacaggggcaagaaaagtgtggaggaggttacagacagatttagacatctgcttttatacggcaggaaaaaggatg ctctagaatgggccatgaagaatggtttgtggggccatgctttattccttgccagtaaaatggactcacgagcacatgcc aatgtcatgacaagatttgccaacaatgctatgaagatgaatgacccgttacagacgttatatcagttgatgtcaggacg tcagccagcagccgttacgtgtataacagatgagaagtggggagactggaggccacacctagctatggtcttatccaatc actcgtcacgaccagacatagaacgcaaatctatcatgacattgggtgatacattggcttccaaaggattccttcatgct agtcatctgtgttatttaatggcacagtgtaactttggttcataccagaagaagacatctaaaatgtatttcaagttttt atatgcgtgtcgtctgtcagagaatggatttgctcaagaggccttacaatatttagaggtcatagctcgtgtcgtacaac aatcacctacattatttcaaccagctctagtcaaattggtttatgagtttgctaaccgtttgaagtattttgaccctcaa cgtcagcagagtggagaggaaacagaggatcctttctggttacaacaattacagcgtattaaccaaggattcatggatgg gtctatacagcctatatctggtagcgtcacgccgtacggagcttacggtttacgtgctgccagtacggagagtggagagg tagcaaactacacaacaggggcagataatctagtcacacaacaatacacagggttccccttcagtagtgatgtcagtcag caaagtggacaagtggtagatcagtcacagtatcaccaaactggggccgatcaggggcagcagcaattgtatcagagtga tcttcatcaacattataatcaacatgcccaatatcaacatcaggggcacgtaactcatactgaggggcagacaacccata ctgatgggcagacaactcatgtagaggggcagacaactcatgtagagggacagacaactcatgctgaggcccagccctca caagaaggaatgacaaccgaccaacaacagcagtggcagcagtattattataatcaagggaatcaacaacaaggtcactc agatgtccagccccaaacacatccagaaacaagtttctaccaaccaaacatgcaccagccgtctgttccgtccaatcagc ttatgaatcagcggggcagcatctcatcaacagctaacggcagtatgatgacggatgacgatgaagaggacatagacgat aacgaggaaagtcgggattttaacgacgggggacacagcaacttctcctactttgacaatgttcagcaaacacagggaaa aggaatatttggtggaataatgaataaactctgggggaataagaaaaatgagatgaaattaccaaatgacacgaaaaaat cgcaggtaatatttaccatcactccacctcctccacctaaagacactagtataccttcagcaggccctgctccaacagaa tctaccatggggcctcctgcaggaaacaagttttctctaagaagaggtgctgcgtctagatatgtagatgtaatgaattc taagcctgctccaaccaaggatgtaccacagagtttgttcaatgttatgccatcatcacattcgtcaccagctatattta gccccggtggacctggggacgattccagtgtgacagacacaggtcaaccacagcctactataacacagcccacgataaca cagcctgctgtaacacaggaagctactaacactagtggagagcttaacaacccaaagacagagccatcagccaatggaat gccagttatgtttaaccccgcccagtttcaaagcagccaatcaactggaagctttcagtcgggatcaaacagatcttcag gcagattacgacccggacaaagaagacagtatcctaaataa |
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Protein
| Protein ID | pfu_aug2.0_1267.1_24822.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1267.1_24822.t1 MSQPAPWSYQGTNPGHDTGQVKMFDPSNTVSDPGQVKMFDPSQMQGSNQPSVPLYNGQPENSADHGQGQGYFSQGQEQNG TSEQQNYQGQYYQYGNGQMQYGYDQTQNMDANQQYYNPGQYWDPNQQWQNYNQQSYEQYQGQGQQWTNQEYDPSGGNSLN VHAEQFVPNNYQQAGYDASQGQGHINQEQIGQGYGEDDSLDQSHASVTSESSTSYSQSNDTSGLGGFFHGDSVSDSCGTS MNSGVFDDKSKAQEHKDSEQEHIQSEFSNESLRTVNYSSASLPVSQQGDEINAITSQVQEISLTTDTENHNVSSVQDNVI QTFSSNQPVSHYNQQPSAPHQEGVSTGVPETSSGGSQNSEGLSDWEVVPPQTLSVPGHQSREGSTHRLPPMPPRGGPPKG SGEDAGNPFRRDKGKVTNYTIPPTQGQSFTPHSAPQDMKSNEKLTLDVSATESGIPSPIMSSSEETVTVSHPNTPPVAPK SSQSPILPRKESPFQPPSRRRTLSGQSSGSIEEKPQLESQLSNEGGSKQEKVIETREKSASISSQSSRGSSGKGEPAKSG DKTQSDRERELSKYQERIKKASRPPPGPPRGVMSPRRIESAFQQVQKQRAKHNMSPATSLWAAPASGTGSSVSSAKTSPA KSTKETTRDVLSPVQMLITSLSEKQSKESTPERSMTASDKGSRKPDASRPTDKRYDVGRDRRETRRDISPSRDRHDRGSS IDRELEISRKIEDRDLRKDRDDYYRDRERDYYRDDRYRGRDSRGPRDPRDRDPRDRDPRDRDYDPYQDRRYRDRGYYGDE RYDRPRSRHSLLDEERSSSRQGSESERPRSRQDSDRPRSRQEYGRDYYYRDKYGRDTLVNIMIDMDLRMRKVTDKVREVD PGYTPLDHCLILGISQVRPGRMTPAKHSIPHLCVRFGPGGQLVKVLPNRPADGEPATVEIHDISQVLQDNLETDELKSFP GPLVRGDTHKNDVLVFCQRKAKECLDNVQMMDRESAALIWKYLELLIKQNGTCVGTDVADLLLEGHEPTTVDYSMMGLRI QSQDNLDEELNETTETNFSMVTADRSVINRGKKSVEEVTDRFRHLLLYGRKKDALEWAMKNGLWGHALFLASKMDSRAHA NVMTRFANNAMKMNDPLQTLYQLMSGRQPAAVTCITDEKWGDWRPHLAMVLSNHSSRPDIERKSIMTLGDTLASKGFLHA SHLCYLMAQCNFGSYQKKTSKMYFKFLYACRLSENGFAQEALQYLEVIARVVQQSPTLFQPALVKLVYEFANRLKYFDPQ RQQSGEETEDPFWLQQLQRINQGFMDGSIQPISGSVTPYGAYGLRAASTESGEVANYTTGADNLVTQQYTGFPFSSDVSQ QSGQVVDQSQYHQTGADQGQQQLYQSDLHQHYNQHAQYQHQGHVTHTEGQTTHTDGQTTHVEGQTTHVEGQTTHAEAQPS QEGMTTDQQQQWQQYYYNQGNQQQGHSDVQPQTHPETSFYQPNMHQPSVPSNQLMNQRGSISSTANGSMMTDDDEEDIDD NEESRDFNDGGHSNFSYFDNVQQTQGKGIFGGIMNKLWGNKKNEMKLPNDTKKSQVIFTITPPPPPKDTSIPSAGPAPTE STMGPPAGNKFSLRRGAASRYVDVMNSKPAPTKDVPQSLFNVMPSSHSSPAIFSPGGPGDDSSVTDTGQPQPTITQPTIT QPAVTQEATNTSGELNNPKTEPSANGMPVMFNPAQFQSSQSTGSFQSGSNRSSGRLRPGQRRQYPK |
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