Gene
| Gene Model ID | pfu_aug2.0_1267.1_24823 |
|---|---|
| Locus | scaffold1267.1 : 84386 ... 91970 : + |
| To GenomeBrowser | scaffold1267.1:84386..91970 |
| Genes list of scaffold | scaffold1267.1 |
| Synonym | pfu_aug1.0_59278.1_63543 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| vesicle-trafficking protein sec22b-like | GO:0006810 GO:0012505 GO:0043231 GO:0044444 GO:0098588 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1267.1_24823.t1 | 2 | 1 | Synaptobrevin | 32 | 43 | 3.1e-18 | 65.1 | 0.85 | 3100.0 | -2.2 |
| pfu_aug2.0_1267.1_24823.t1 | 2 | 2 | Synaptobrevin | 89 | 170 | 3.1e-18 | 65.1 | 8.4e-22 | 3.1e-18 | 65.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1267.1_24823.t1 | gi|676444214|ref|XP_009050356.1| | hypothetical protein LOTGIDRAFT_231136 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1267.1_24823.t1 | gi|524913662|ref|XP_005111656.1| | PREDICTED: vesicle-trafficking protein SEC22b-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1267.1_24823.t1 | gi|556971491|ref|XP_005994129.1| | PREDICTED: vesicle-trafficking protein SEC22b-like [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_1267.1_24823.t1 | gi|260811117|ref|XP_002600269.1| | hypothetical protein BRAFLDRAFT_113706 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1267.1_24823.t1 | gi|586529676|ref|XP_006919754.1| | PREDICTED: vesicle-trafficking protein SEC22b-like [Pteropus alecto] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1267.1_24823.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1267.1_24823.t1 atggttttaatgacaatgatagcacgagtggctgatgccttgccattagctgcttctatgcaagaagatgaacaggctgg gagaaaccttatggactatcaaaaccaagccaagcagctattccgtaagctatcccaggatccccaaccaccaagtagat gtagcttagaaacaggaccttatatatttcagaatatcaaaccttacacagaagacacctacatacagaaggccaggaag tcgtatatggattccagagccaggaaaaatctgtccaatataaacacagagctacaagatgttcatagaattatggtaca gaatattgaggatgttctagtcagaggggaatcattgtcaacattggacaataaagctagtaacttatcatcactttcac agaaatataaaaaagacgctacgtatctcaatcttagatcatcgtatgccaaaatagctgcaatagtcatagtcatcatt gtgtttttattatttgttcgttatttatggtggtga |
|
Protein
| Protein ID | pfu_aug2.0_1267.1_24823.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1267.1_24823.t1 MVLMTMIARVADALPLAASMQEDEQAGRNLMDYQNQAKQLFRKLSQDPQPPSRCSLETGPYIFQNIKPYTEDTYIQKARK SYMDSRARKNLSNINTELQDVHRIMVQNIEDVLVRGESLSTLDNKASNLSSLSQKYKKDATYLNLRSSYAKIAAIVIVII VFLLFVRYLWW |
|