Gene
| Gene Model ID | pfu_aug2.0_1269.1_31579 |
|---|---|
| Locus | scaffold1269.1 : 103453 ... 111775 : - |
| To GenomeBrowser | scaffold1269.1:103453..111775 |
| Genes list of scaffold | scaffold1269.1 |
| Synonym | pfu_aug1.0_25102.1_62350 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1269.1_31579.t1 | 1 | 1 | FragX_IP | 1 | 43 | 4.9e-10 | 37.8 | 5.3e-14 | 7.8e-10 | 37.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1269.1_31579.t1 | gi|662188760|ref|XP_008488068.1| | PREDICTED: cytoplasmic FMR1-interacting protein-like [Diaphorina citri] | 2.0e-12 |
| pfu_aug2.0_1269.1_31579.t1 | gi|662188758|ref|XP_008488067.1| | PREDICTED: LOW QUALITY PROTEIN: cytoplasmic FMR1-interacting protein-like [Diaphorina citri] | 3.0e-12 |
| pfu_aug2.0_1269.1_31579.t1 | gi|759081804|ref|XP_011350767.1| | PREDICTED: cytoplasmic FMR1-interacting protein isoform X1 [Cerapachys biroi] | 4.0e-12 |
Transcript
| Transcript ID | pfu_aug2.0_1269.1_31579.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1269.1_31579.t1 atgggttactaccaagctcagctaaatgatcttatacagtatccagatctgaggacggaagtattccaaggtttccgaga ggtcggcaattctttcctcttctgtctgcttgtagaacaggctctgagcaccttgtacatgttgaatgacgatcgtgtgt gtttcatagtaaacaatctggagctgaaatgcagaggttttggtgcgggaacgtacacaccacagagacccatggcgaac atcgagaggcttacaatagacaaactgtcacaggatgcatttttagaattgccgaatgccttcttaagtaaactgaaact tgttatagtccagaattctcccgattttccatgcgccaatgtgaaaagcacagtggagggactcgccattttgataaatg ggaaaaggtgtcagacacatgatgatccaaagaccccaccacagtgtaccactaccccaagggatgaaacaacaaccagc aatgtggaatcaaacagctcagtagaacaattgtggagtgtaatcatcacacttgcagaatatgtagttcaagttggagt tgttgtttttgtcctaacgtttagacagtggtttcggcaattaccacctcctcaccagctaggaaataggattaagggaa aaactatttccctaagatttgacgaatttttagagttgagtaagcagacagatgaaataaggaaagcttacagtatcttc atgaaagaggaactggaaatagagagaactctggaagaagccctggcttccgcaaaagaatccgtccataaggaggaaac cttgacctcaaggaagaagaagaggaaggagtga |
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Protein
| Protein ID | pfu_aug2.0_1269.1_31579.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1269.1_31579.t1 MGYYQAQLNDLIQYPDLRTEVFQGFREVGNSFLFCLLVEQALSTLYMLNDDRVCFIVNNLELKCRGFGAGTYTPQRPMAN IERLTIDKLSQDAFLELPNAFLSKLKLVIVQNSPDFPCANVKSTVEGLAILINGKRCQTHDDPKTPPQCTTTPRDETTTS NVESNSSVEQLWSVIITLAEYVVQVGVVVFVLTFRQWFRQLPPPHQLGNRIKGKTISLRFDEFLELSKQTDEIRKAYSIF MKEELEIERTLEEALASAKESVHKEETLTSRKKKRKE |
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