Gene
| Gene Model ID | pfu_aug2.0_1269.1_31580 |
|---|---|
| Locus | scaffold1269.1 : 117916 ... 135333 : + |
| To GenomeBrowser | scaffold1269.1:117916..135333 |
| Genes list of scaffold | scaffold1269.1 |
| Synonym | pfu_aug1.0_447.1_29266 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1269.1_31580.t1 | 2 | 1 | PCI | 183 | 218 | 1.5e-19 | 70.1 | 0.39 | 1900.0 | -0.9 |
| pfu_aug2.0_1269.1_31580.t1 | 2 | 2 | PCI | 269 | 364 | 1.5e-19 | 70.1 | 1.2e-22 | 5.8e-19 | 68.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1269.1_31580.t1 | gi|676429153|ref|XP_009045507.1| | hypothetical protein LOTGIDRAFT_203414 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1269.1_31580.t1 | gi|524903803|ref|XP_005108094.1| | PREDICTED: COP9 signalosome complex subunit 4-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_1269.1_31580.t1 | gi|749787629|ref|XP_011147331.1| | PREDICTED: COP9 signalosome complex subunit 4 [Harpegnathos saltator] | 0.0 |
| pfu_aug2.0_1269.1_31580.t1 | gi|752890000|ref|XP_011262973.1| | PREDICTED: COP9 signalosome complex subunit 4 [Camponotus floridanus] | 0.0 |
| pfu_aug2.0_1269.1_31580.t1 | gi|345480212|ref|XP_001607868.2| | PREDICTED: COP9 signalosome complex subunit 4 [Nasonia vitripennis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1269.1_31580.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1269.1_31580.t1 atggcttccaatgtgcgacagcaactgtcacaactggcaactctgtctcattctggtggttctcacaaggaagtgacaga aaaatataaagggattttggagggaatactgaagtcaggaggcagtgatttagtagcaagcctgcaagcttttgttgaag cattggtaaatgagaatgtcagccttgtcatatcccgacaactcctcacagatttctgctcacatctaccaaagttagat gatgttgtggccaaacaaatcgctcattttacactggagaaagttcacacaagggtcatttcctttgaggagcaggtggc cgccattagacagcatctggctgatatttatgagagagaacagtcgtttagggaggctgctaatgtactggtggggatac cactagagacaggacagaaacagtatcccactgactacaagttagagacatacctaaaaatagctcgtctgtatctagaa gaggatcccatccaggctgaggcttatataaatagagcgtcacttctacaggccgactccaaaaatgaggaacttcagat acattacaaggcttgttatgcccgtgtcttggattatagaaggaagtttattgaggctgcacagagatataatgaacttt catacaaaaatatcatagcagatgcggagaggatgacagccctaaaaaacgccctgatctgtacagttttagcttctgct ggtcagcaaagatcaaggatgctagccacattattcaaagacgagcgatgtcagcaactaccagcttataatattttaga gaaaatgtacttagacaggataatcagaagtagtgatctacaagaattctctgcccttctccagccacatcagaaagctg ttacatcagatggttccaccatacttgatagagctgtaatagagcataaccttctctctgccagtaaactatataataat atctcatttgaggaacttggctcacttctggaaattcctccttcaaaggcagaaaagattgcatcacaaatgataacaga aggtagaatgaatggctgtatagatcaaattgactccatagttcactttgaagcaagagaagccttaccaacgtgggaca agcaaattcagagtctctgtttccaagtcaataacattattgaaaaaatatcccaccatgcaccagaatggatgaaccgg acaattgaagctcagatggccgagacgtga |
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Protein
| Protein ID | pfu_aug2.0_1269.1_31580.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1269.1_31580.t1 MASNVRQQLSQLATLSHSGGSHKEVTEKYKGILEGILKSGGSDLVASLQAFVEALVNENVSLVISRQLLTDFCSHLPKLD DVVAKQIAHFTLEKVHTRVISFEEQVAAIRQHLADIYEREQSFREAANVLVGIPLETGQKQYPTDYKLETYLKIARLYLE EDPIQAEAYINRASLLQADSKNEELQIHYKACYARVLDYRRKFIEAAQRYNELSYKNIIADAERMTALKNALICTVLASA GQQRSRMLATLFKDERCQQLPAYNILEKMYLDRIIRSSDLQEFSALLQPHQKAVTSDGSTILDRAVIEHNLLSASKLYNN ISFEELGSLLEIPPSKAEKIASQMITEGRMNGCIDQIDSIVHFEAREALPTWDKQIQSLCFQVNNIIEKISHHAPEWMNR TIEAQMAET |
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