Gene
| Gene Model ID | pfu_aug2.0_127.1_23513 |
|---|---|
| Locus | scaffold127.1 : 51288 ... 62915 : - |
| To GenomeBrowser | scaffold127.1:51288..62915 |
| Genes list of scaffold | scaffold127.1 |
| Synonym | pfu_aug1.0_6189.1_38278 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_127.1_23513.t1 | 2 | 1 | MFS_2 | 11 | 285 | 6.1e-19 | 67.7 | 4.7e-20 | 3.5e-16 | 58.6 |
| pfu_aug2.0_127.1_23513.t1 | 2 | 2 | MFS_2 | 295 | 351 | 6.1e-19 | 67.7 | 8.3e-05 | 0.62 | 8.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_127.1_23513.t1 | gi|694629749|ref|XP_009490931.1| | PREDICTED: transmembrane protein 180 [Pelecanus crispus] | 0.0 |
| pfu_aug2.0_127.1_23513.t1 | gi|543249693|ref|XP_005417389.1| | PREDICTED: transmembrane protein 180 [Geospiza fortis] | 0.0 |
| pfu_aug2.0_127.1_23513.t1 | gi|632984264|ref|XP_007909054.1| | PREDICTED: transmembrane protein 180 [Callorhinchus milii] | 0.0 |
| pfu_aug2.0_127.1_23513.t1 | gi|148236976|ref|NP_001088248.1| | transmembrane protein 180 [Xenopus laevis] | 0.0 |
| pfu_aug2.0_127.1_23513.t1 | gi|542144280|ref|XP_005481198.1| | PREDICTED: transmembrane protein 180 isoform X1 [Zonotrichia albicollis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_127.1_23513.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_127.1_23513.t1 atgagcagcgtaagaattcccgcagatatatgctacgggtcacttgccttcttccagtcaatactccataacattttcct cctataccatgtggatattttcgtgtctgtgtataagatagataaaacatcattttggattggtgaaggaattttcttga tctggaattccttaaacgaccccatatttggctggatcagtgacaaggatttcttagggacgtccacacacagcccgtca aacaaggagattgtcagtaaacgattaaaagctctgaaaatcaatggaccaatttttgccttgacatttctgttattttg gtttccgtggggttatgcccctttgcagtttgttatatgtctgtgtttatatgacagttttctcaccatgatagatttgc atcattcagcattgttagcagatcttgccatctctgcagaaatccgtgcaaagctcaactggaaaagctccttttttagc gcactaggatctcttgccgtatttgtctcctatgcagtatggaggagggaaaacctttggactttcagaatgttctgcct tatactggccttaagctccattgtaggtttttacatcatcacaaactttctccaaactgccttccatagtagcatcaagc agtatgaactaacaagcattcaggatccagaattcagtgttgagagatccagttcacataaagaagacagaccaagtttt aagagatttatcactcaacttttgaggcagcaaaattttgttcttttttcggtgatgaatttagttcaggtgtttcactg ccatttcaacagcaattttttcccgcttttcctggataatttactaggaagtagcatttctcctggttttgggtcatttt taatagagggaacgtgcaagcttctaaatctggtcatcagtgatttggtagatgaagattttgttgtccatggtcgtaaa aaagccgtgtctgctctgatgttcggtacatctgcactagtctctaaacctggtcaaactctcgccccactggtcgggac atggttcctctcattacaaactgatgctgttcacctctttcagataaattcagcttttatagaaaggacacaaaattaa |
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Protein
| Protein ID | pfu_aug2.0_127.1_23513.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_127.1_23513.t1 MSSVRIPADICYGSLAFFQSILHNIFLLYHVDIFVSVYKIDKTSFWIGEGIFLIWNSLNDPIFGWISDKDFLGTSTHSPS NKEIVSKRLKALKINGPIFALTFLLFWFPWGYAPLQFVICLCLYDSFLTMIDLHHSALLADLAISAEIRAKLNWKSSFFS ALGSLAVFVSYAVWRRENLWTFRMFCLILALSSIVGFYIITNFLQTAFHSSIKQYELTSIQDPEFSVERSSSHKEDRPSF KRFITQLLRQQNFVLFSVMNLVQVFHCHFNSNFFPLFLDNLLGSSISPGFGSFLIEGTCKLLNLVISDLVDEDFVVHGRK KAVSALMFGTSALVSKPGQTLAPLVGTWFLSLQTDAVHLFQINSAFIERTQN |
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