Gene
| Gene Model ID | pfu_aug2.0_127.1_23516 |
|---|---|
| Locus | scaffold127.1 : 115234 ... 121885 : - |
| To GenomeBrowser | scaffold127.1:115234..121885 |
| Genes list of scaffold | scaffold127.1 |
| Synonym | NA |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| dihydrofolate reductase | GO:0006725 GO:0034641 GO:0046483 GO:0097159 GO:1901360 GO:1901363 GO:1901605 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_127.1_23516.t1 | 1 | 1 | DHFR_1 | 13 | 191 | 1.5e-24 | 86.3 | 1.2e-28 | 1.8e-24 | 86.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_127.1_23516.t1 | gi|543372592|ref|XP_005529516.1| | PREDICTED: dihydrofolate reductase [Pseudopodoces humilis] | 1.00053e-42 |
| pfu_aug2.0_127.1_23516.t1 | gi|675416150|ref|XP_008921312.1| | PREDICTED: dihydrofolate reductase [Manacus vitellinus] | 1.99965e-42 |
| pfu_aug2.0_127.1_23516.t1 | gi|527251028|ref|XP_005143820.1| | PREDICTED: dihydrofolate reductase isoform X1 [Melopsittacus undulatus] | 3.00018e-42 |
| pfu_aug2.0_127.1_23516.t1 | gi|733926781|ref|XP_010724401.1| | PREDICTED: dihydrofolate reductase [Meleagris gallopavo] | 3.00018e-42 |
| pfu_aug2.0_127.1_23516.t1 | gi|133778969|ref|NP_001006584.2| | dihydrofolate reductase [Gallus gallus] | 3.00018e-42 |
Transcript
| Transcript ID | pfu_aug2.0_127.1_23516.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_127.1_23516.t1 atggactcgatacgtttaagagggaagtactttgatgtcatggcggctatgtgtgagaacagggggattggccatgatgg aaggttaccctggccgtcactcaagaaagaatatgagtactataccactttaacagcaacaccttatactaaaggcaaga agtgtgcatgtatcaaaggtcggacaacttggaattcaaccgatgaaatggaacgccaaagaaagaacgttgtcaatatt gcaatctctagaaatccagaacaacttcagtatcaagatgacattcatcatatagcaaaaagttttgacgacgccgtggc cttttgtttctcttctctccttgcgtcagagatagaccgagtatgggtccttggtgggcaggaggtatatcagactgctg tctttcacccgctttgtcggagagtatacttaacaaatatcctcaaggaattccctgctgatagattcttccctatatta ggaaatacattcaaagacattcaaacaaatgaaattgatagtgcaataacagaagagaatggcatttcgtatgaaattaa agtatatgaacggaaaacggattga |
|
Protein
| Protein ID | pfu_aug2.0_127.1_23516.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_127.1_23516.t1 MDSIRLRGKYFDVMAAMCENRGIGHDGRLPWPSLKKEYEYYTTLTATPYTKGKKCACIKGRTTWNSTDEMERQRKNVVNI AISRNPEQLQYQDDIHHIAKSFDDAVAFCFSSLLASEIDRVWVLGGQEVYQTAVFHPLCRRVYLTNILKEFPADRFFPIL GNTFKDIQTNEIDSAITEENGISYEIKVYERKTD |
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