Gene
| Gene Model ID | pfu_aug2.0_127.1_23518 |
|---|---|
| Locus | scaffold127.1 : 139226 ... 141798 : + |
| To GenomeBrowser | scaffold127.1:139226..141798 |
| Genes list of scaffold | scaffold127.1 |
| Synonym | pfu_aug1.0_17504.1_11037 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_127.1_23518.t1 | 1 | 1 | Cu_amine_oxid | 366 | 495 | 4.3e-21 | 75.1 | 4.1e-25 | 6.0e-21 | 74.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_127.1_23518.t1 | gi|591359651|ref|XP_007054804.1| | PREDICTED: membrane primary amine oxidase-like [Chelonia mydas] | 2.0e-35 |
| pfu_aug2.0_127.1_23518.t1 | gi|71896177|ref|NP_001025584.1| | amine oxidase, copper containing 2 [Xenopus (Silurana) tropicalis] | 9.0e-33 |
| pfu_aug2.0_127.1_23518.t1 | gi|697816335|ref|XP_009646901.1| | PREDICTED: membrane primary amine oxidase [Egretta garzetta] | 1.0e-32 |
| pfu_aug2.0_127.1_23518.t1 | gi|147899782|ref|NP_001087039.1| | amine oxidase, copper containing 2 [Xenopus laevis] | 1.0e-32 |
Transcript
| Transcript ID | pfu_aug2.0_127.1_23518.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_127.1_23518.t1 atgtctgttaccgagacaggaaacggcgatttcaagtcatttgctggggaggggcaagtgcaccccgacctgaggaacaa taatgtgaaaacggaaacttcaacgacatggaaaatttgtatttatttaatcatcagcatagttatatttactgcaggac ttatcattggatattttgtcggtaattatttatttgggaaaatagaaccatcagatgttgaaggggatcgtccaaatggt acgaccactagcccgtttttaaaatgggaggggcagagtgtattcgctcctttatccgttgaggaacatcagatagtcaa agaaagagtattgctagagggacttattagaagaaataattccatctacagacccgacgattacttattatacgatttaa tttatgatatccatgtacattaccccaacaaaacccgtattctcgaacacttggacaacggaggtaaattccctggtcgt tttgccatggtgtatctatatcaagggagtttactgaaacctgcattcaccgagtatgttgtaggtccgttagagaggga tctgtcaaaaatcaacgtcgtccttcataggagactgaccggaccaacatttaataaaagaccaaagatacccagagaaa ccgtgtttatatctaaattagcgcgcaagcaattcaaagtccttgatcctttactgaaggtatcttttgacggtttagtg tacggatataacgaaacattagatatggcattgcgggaaacttatgctatactgaatactaatgttccatacaaacgagc ctccagagcctatctaactttaacgaaccatttggatactttggatatggtccccgtgacggccattgttcaccatgata ctttgaatgctagtgaatggtctatggataatttctactactatggtcaagggcctttcagtaatgcttctcatttgatg gaatcgttcagaaaaggaattcttcgtgtggtgaaatttccggaaggctatgtgaaagaaataatcaaaaagagagaata ccttcaaaacaagacagaaccgttgcgacagaaagcaaacctaagaccgtctattacttatgctccagaaagcccaagat acaccatcaaaggccatatcgtcgaatggatggggtggtcatttgagctcagtgcaaattcttttcgcggcccgagtatc ttcaatgtgaaattcaaaaatcaaagaatactatacgagcactcattaaatgaactaaaccttttgtattcatcttcaac tgtcggtggcggcttttcgaatattgttatgtctgatatagcatataagctcggaaatcgaatgagtttcataagagggg ttgattgtcccgaatatgcctccattgtaaatgcttcaacttggatccgatcaagagggagaataagacctacgttttgc gtgttcgaagtcgacggacaaagagccctttggagacactctggagcctattattccgctgggctacntcagaaacaaat ggggaaacaaacgtggatacagcatctcccatactag |
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Protein
| Protein ID | pfu_aug2.0_127.1_23518.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_127.1_23518.t1 MSVTETGNGDFKSFAGEGQVHPDLRNNNVKTETSTTWKICIYLIISIVIFTAGLIIGYFVGNYLFGKIEPSDVEGDRPNG TTTSPFLKWEGQSVFAPLSVEEHQIVKERVLLEGLIRRNNSIYRPDDYLLYDLIYDIHVHYPNKTRILEHLDNGGKFPGR FAMVYLYQGSLLKPAFTEYVVGPLERDLSKINVVLHRRLTGPTFNKRPKIPRETVFISKLARKQFKVLDPLLKVSFDGLV YGYNETLDMALRETYAILNTNVPYKRASRAYLTLTNHLDTLDMVPVTAIVHHDTLNASEWSMDNFYYYGQGPFSNASHLM ESFRKGILRVVKFPEGYVKEIIKKREYLQNKTEPLRQKANLRPSITYAPESPRYTIKGHIVEWMGWSFELSANSFRGPSI FNVKFKNQRILYEHSLNELNLLYSSSTVGGGFSNIVMSDIAYKLGNRMSFIRGVDCPEYASIVNASTWIRSRGRIRPTFC VFEVDGQRALWRHSGAYYSAGLXQKQMGKQTWIQHLPY |
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