Gene
| Gene Model ID | pfu_aug2.0_127.1_23519 |
|---|---|
| Locus | scaffold127.1 : 157786 ... 181929 : + |
| To GenomeBrowser | scaffold127.1:157786..181929 |
| Genes list of scaffold | scaffold127.1 |
| Synonym | pfu_aug1.0_13009.1_61135 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_127.1_23519.t1 | 1 | 1 | TIR_2 | 718 | 816 | 1.8e-21 | 76.2 | 1.7e-24 | 4.2e-21 | 75.0 |
| pfu_aug2.0_127.1_23519.t1 | 1 | 1 | TIR | 718 | 794 | 5.3e-06 | 25.9 | 7.3e-09 | 1.8e-05 | 24.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_127.1_23519.t1 | gi|676481311|ref|XP_009062333.1| | hypothetical protein LOTGIDRAFT_235135 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_127.1_23519.t1 | gi|260816672|ref|XP_002603212.1| | hypothetical protein BRAFLDRAFT_93376 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_127.1_23519.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_127.1_23519.t1 atggctctgaaaactcataaaaggaatgtggttataacgagggctgatgtccacgcttccttggacgatatcagacgtgg ggacagagatctagatttgtcagataccgaaagtttggcatcaacagattcatacgggcttgatgaatccctagcaggag ttagtccccctgatttctccatctccaccacgccctgtgaactcttcgcaccacttgccgctgtagaggatatccgcctg accgctttcagtttagccggaagtagacatagtagtgaaggaacaccggaagttgttaatttaacaccagactgttcgaa cactcttgaaactggctcgttgagtagtctttcggtttgcgagagcttacctgaaatctatatagagaaactcttcgact ttttacctcaagatgaaacgaggaaagatggtatcgagggactgtttcaaaatcagatcattaaatcagatagtattttg gatgagcatagtttcagcacgttacgtaaccgtgttttcacgatgaatgacgattttaaggaagtattgatgtcagagct tcataagctacaaaaacagcgtagtgtaggctcgttatccgataccgggtccccgacgcatcatgcgactcgggcgtcag atttactcaaaccggatgtcagaaaaatccccgtcatattgtcgcattgggattcggtagatcagacatgtaaattagat ggaccattgagtctacaagactcctacagtggctctaccatggatgtcaacgacacgggtcaaaccaccgagaggtcagg ccaaaccaccgagaggtccaagactgactcacccatgaaagagtcctcagagagcaggcgcgaaacgctacagtctcaaa actcccagaattcaacgtcacaaatgaacggtgccatagactttgacgaactatgcagtgtcaaaaatttgaaggaggag gaattactacccaaagtaaaggaaattgtgcaagccttaaagggtcttgaagaatacgacagaggagagacgatgaaaat gttaaagagcatctngcaagactcctacagtggctctaccatggatgtcaatgatacgggtcaaaccaccgagaggtcag gccaaaccaccgagaggtccaagactgactcacccatgaaagagtcctcagagagcaggcgcgaaacgctacagtctcaa aactcccagaattcaacgtcacaaatgaatggtgccatagactttgacgaactatgcagtgtcaaaaatttgaaggagga ggaattactacccaaagtaaaggaaattgtgcaagccttaaagggtcttgaagaatacgacagaggagagacgatgaaaa tgttaaagagcatctcggatacatactggagttataaaggacatagacataaaattggcgatatattgtcggaggaggga ttcggagaaatcacaatgaagattttgaagactctaaatagtaaggggattttcaagaatgactctatttggtttcctgt atattattgttttaatgtgctatggaattatagtgatgccagtttaaaggtagccaaggatttggctgataacgatggtg tgcgattctttacagtcaactgtgaccatgaaccatacctaaaaaatctacattctaagaatgtatactatgttgttaaa gcctctatgagtattctacaaaacattgccaggaatgctgatgttaaaaaattcttcaaagaatgtgatacctcaaaggt aatgttgaagtttgcaaaatcagaaatagagagccaggagatgctccgggtcttagcaatgttaacactcgctcacacga cagaggaggaagaaaacgaaaaaatcattgatgaaaccgatgcggaatcactaccaattttcctagatctcctgaagggg gaatttcccgaggaacaagcaatagcagccaaagccttgtggaatctatcgtttgataaagatgttgctacaaagattaa ggaacatccggaaatgatggagtcactagagaaactgaagagtagttacgacaaatctgtgcaacgaaatgtaaacgggc tgctgtttgtattgaagggagagaatgatgtatcaaaaagaccaaaatctggcaaaaggaacaaaggacatgtattctta agctattcctggaatgagaaagatatcgttatgaaattaagagaaaggttaaagcaagctggttatgaggtgtggattga cgtggagagaatgggtggatccactctgagtgccatggcggacgctgtagagaatgctgctgtagtcattatttgtatgt cagagaaatacaaacagagtcccaactgtagactagaggctgaatatacataccagctaaggaaggactatatacccctg atgttacagagaagctacaggccagacggttggctggggatgatactcggtgccaaactctactttgatttcagtggaaa atatccattcgaaaaaccctggaatgggctaaccaaagaactgaagagtcacagtagcctgcatacgtctgaaagctcag gaaaagatgtaacaaggtga |
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Protein
| Protein ID | pfu_aug2.0_127.1_23519.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_127.1_23519.t1 MALKTHKRNVVITRADVHASLDDIRRGDRDLDLSDTESLASTDSYGLDESLAGVSPPDFSISTTPCELFAPLAAVEDIRL TAFSLAGSRHSSEGTPEVVNLTPDCSNTLETGSLSSLSVCESLPEIYIEKLFDFLPQDETRKDGIEGLFQNQIIKSDSIL DEHSFSTLRNRVFTMNDDFKEVLMSELHKLQKQRSVGSLSDTGSPTHHATRASDLLKPDVRKIPVILSHWDSVDQTCKLD GPLSLQDSYSGSTMDVNDTGQTTERSGQTTERSKTDSPMKESSESRRETLQSQNSQNSTSQMNGAIDFDELCSVKNLKEE ELLPKVKEIVQALKGLEEYDRGETMKMLKSIXQDSYSGSTMDVNDTGQTTERSGQTTERSKTDSPMKESSESRRETLQSQ NSQNSTSQMNGAIDFDELCSVKNLKEEELLPKVKEIVQALKGLEEYDRGETMKMLKSISDTYWSYKGHRHKIGDILSEEG FGEITMKILKTLNSKGIFKNDSIWFPVYYCFNVLWNYSDASLKVAKDLADNDGVRFFTVNCDHEPYLKNLHSKNVYYVVK ASMSILQNIARNADVKKFFKECDTSKVMLKFAKSEIESQEMLRVLAMLTLAHTTEEEENEKIIDETDAESLPIFLDLLKG EFPEEQAIAAKALWNLSFDKDVATKIKEHPEMMESLEKLKSSYDKSVQRNVNGLLFVLKGENDVSKRPKSGKRNKGHVFL SYSWNEKDIVMKLRERLKQAGYEVWIDVERMGGSTLSAMADAVENAAVVIICMSEKYKQSPNCRLEAEYTYQLRKDYIPL MLQRSYRPDGWLGMILGAKLYFDFSGKYPFEKPWNGLTKELKSHSSLHTSESSGKDVTR |
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