Gene
| Gene Model ID | pfu_aug2.0_127.1_23520 |
|---|---|
| Locus | scaffold127.1 : 191090 ... 243974 : + |
| To GenomeBrowser | scaffold127.1:191090..243974 |
| Genes list of scaffold | scaffold127.1 |
| Synonym | pfu_aug1.0_41300.1_05174 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_127.1_23520.t1 | 1 | 1 | DHHA2 | 211 | 355 | 1.8e-19 | 70.1 | 2.2e-22 | 6.7e-19 | 68.3 |
| pfu_aug2.0_127.1_23520.t1 | 6 | 1 | BNIP2 | 386 | 432 | 3.0e-19 | 69.4 | 1.2 | 3400.0 | -1.9 |
| pfu_aug2.0_127.1_23520.t1 | 6 | 2 | BNIP2 | 561 | 596 | 3.0e-19 | 69.4 | 0.76 | 2300.0 | -1.3 |
| pfu_aug2.0_127.1_23520.t1 | 6 | 3 | BNIP2 | 903 | 903 | 3.0e-19 | 69.4 | 5.0 | 15000.0 | -42.3 |
| pfu_aug2.0_127.1_23520.t1 | 6 | 4 | BNIP2 | 1338 | 1376 | 3.0e-19 | 69.4 | 5.0 | 15000.0 | -9.8 |
| pfu_aug2.0_127.1_23520.t1 | 6 | 5 | BNIP2 | 1534 | 1534 | 3.0e-19 | 69.4 | 5.0 | 15000.0 | -26.8 |
| pfu_aug2.0_127.1_23520.t1 | 6 | 6 | BNIP2 | 1900 | 2016 | 3.0e-19 | 69.4 | 1.0e-22 | 3.0e-19 | 69.4 |
| pfu_aug2.0_127.1_23520.t1 | 1 | 1 | CRAL_TRIO_2 | 2018 | 2146 | 4.9e-28 | 97.9 | 3.6e-31 | 1.1e-27 | 96.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_127.1_23520.t1 | gi|676455864|ref|XP_009054144.1| | hypothetical protein LOTGIDRAFT_74903, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_127.1_23520.t1 | gi|291398019|ref|XP_002715618.1| | PREDICTED: protein prune homolog isoform X1 [Oryctolagus cuniculus] | 0.0 |
| pfu_aug2.0_127.1_23520.t1 | gi|634876330|ref|XP_007949106.1| | PREDICTED: protein prune homolog [Orycteropus afer afer] | 0.0 |
| pfu_aug2.0_127.1_23520.t1 | gi|617641127|ref|XP_007531644.1| | PREDICTED: protein prune homolog [Erinaceus europaeus] | 0.0 |
| pfu_aug2.0_127.1_23520.t1 | gi|591324207|ref|XP_007088155.1| | PREDICTED: protein prune homolog isoform X1 [Panthera tigris altaica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_127.1_23520.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_127.1_23520.t1 atgttgtcttcttgggtacacttgcatgaaggtgacacacctatacatgtggtgataggtaatgaatcatgtgacctaga ctctgtggtttcggccttgacttttgctttttacttgggtcaaatatctgctgatgacactattttcataccagtattaa acatccaacgaagtcagtatcccctcagaacagaatcaacattctttcttaggaaaaacagcataactgatgaactcttg acctttagagatgaccttgaccttcaaaaacttcatagaagtggcaaactgaccttgacccttgttgacaggaatgtact ggacactcaggatgaagaaatggaaacatcggttaggagagtgattgatcatagaccattagagagaaaaaatacagaca acatagatattactgtggacacagtgggctcatgctgtaccttggtagcagaaaaactactcgacgatgaaaagttcacc attgaccaccaggtggcagtgctgctttatgggacaattctagtagatacagtaaacacgagtccagaagcaggaaagac aactcttcgtgatactgctgtcctatctaagctcagacagatgttgtcagacgtagatggaaatcagctctacaacagca tacaacaagccaaaaatgatgtctctggtctgaccacagtagaagtattagagaaggacctaaaaatgttaaccgagggc aaactgaaagtagctatgtcctctataccactagatctcaaggactttctgtctcgacctaatttggccaatgatgttga agctttttgccagaagaatattgctgatgtactggtgatcctgaccatgcatgtagacaatgacctccctcacagggagc tggctgtctatgccggtaatgctgtatacagacaaaaaattgtgtcagtattagaggcgtcattagatcctggcttagag cttgtaagattcctgtcagattctactcctgcctttgtggcatacacacaaggaaacgtaaaggcatcgagaaagaaaat tcttcccattgtgaaagcctttatgaaagatatgtcacaagatgggtctcaaactgaccaatcaaataactccttactag actttggtgattttgatccattttcagtgactaactcaaactccgataaaaatagcggtgcagatactgatgtggcagcg ttactttcgtttgacgaaatgtctcaaactgctgataatgaaaaacggttgtcactggctggtaaacaggaaagtactga ggaagccgatcaagttgaggaaaccagtaatttgcccttcactcctaaaaatagtttttgtgatagccaatttgacacct tctatcaaaataatacacttcctagtctaagtgctcatgatatggtgcagaaagtacaaaacaaaagaatgtcattagag gctaacgatgacttacttggtgctagtagtttattagacaatatacccccactcaagcctcaaaataatgtgatggaaaa ttttgatttattacagacggacagtgcattacaaagtagtgaaaatgtcggtcaaagttgtgatttgttagatattgagc ctaaagagacacaaaatattgtggccgtggaaatcgctaaagaaatgaaaaatgaaaatacgtcaaatattgccgatctc cttgacttagactttacaggtgggaatgatcctgatgattctaaaggtgataaaaatgataatacaaacctgcttgattt gacctctggtaaccaagcaacaaccaatcagagcacagataactcagatttaaatttgaattcgctgacgtccaatcaaa tgttagaagcagcagatttggcagcacaagaggaggccatccgttcttttacgaaggagataatacaggacgtattggag aaggtctctagcagtccccctgaagacttagtagatgcggagagatctttggcagacgagggaaaatctggcttactttt agatgtgaataacgagcacacagccatacagagaactccaagtgccaatggtttgactgtagaaacagagtacctgtcca acatggacccattacaaggtaaccttgacctggtttccagagggggcagtgacccagaggtcgtggagagcactagcttc cgtaagattagtggcgaagaaccaatgacagtcaggaaagaaattctagatttaagcaaagctgagacggatgtagacaa aggggagaaagacgatcatctcaaaaattccgagaaggaagtatcaaaagaggatgtaaacaaatctaataagatagcat caaatggcaatgaaaatgctgacataaatgcagaagaaaaagtaagtgattgctttgaaaatgagaataacagcgtgtgt gatactaacaaaaatcccaaggaaatattaactagtgtaactgatgatcaacaaagagatgacttttctaggaatgatgt taataaggagaatagtgaaattctctccgtgaaatatgtagaaaatcttgtgaacgagaccataggagaagtaatcaaaa gtgtagctaaagaagagcaggaagggaaagggacaagtgacgctaaatcaagaaacacgaaaatggacaatgattcggaa ataagttctgaggagttagaatcatttgaaggggtgcactctgactctgaaagtgaaagtaagggaattccacaatcgga tcaagatcagcagaagtcgaaactgcaggtagatgttagtttgttagagaaggaggactcaagcctgacagagggtagct gtgatactagcagtactgatggagagaaagatagggaggagtatagagaaaaagaatgtatttcagagcctgatagtgga cagaatgatgtagaacttgtagaggctagttcagagcattccgacataagtagtggtggaataagttcacctgatcaaaa attggttttagaatttgagacgagcctgggccataattcttcttctacttctgatgtaagttcaacaacgacagagggaa gttataaactgattcagtctccagaagttgtcaaagaaaatgtatgtgaagatgaagctaaacagaataaagaagatgat gataacccagaggaaattcagaccaaagaaatatcggctcaaaatgaggaattgttgagtgtaatgccatcaacaacaaa aaggaaagtgaagttgaaaagtaataggaattttagtatcagtagcgagagcatgtcatcggacgatgaggcgaagagcg acctttcacctctgggagaattaacttctgagcttgaggcagagggtcagcgtgaagatgtgtctagtaatgttacagct gcgactgataagaaagtgatatcgtttataagcgaggatttaatagacgacgcagatgatgacagactgaggtcagagtc ggaacagtctgtgcaggaggaaccggatagtaaaacagtacagaaagagtacttcatgaccactgctggtaggattagtg taggatgtgaggaaggggagaggacacttagtgaggacataacacagagagatgaggcattgactgaggtagggaggatc attacacatgttaatggcctgattacacaggttgatgcttctattgcacattcctcagaccaaattgcacaacttgattc ttcttttcctaactcacatgaaccggttccaaaggtggattccacccctgcatgttcacaagatccacctgcacacccgc cttcctctctctgcatggagtcacagagaattccaagtgccaatggtttgactgtagaaacagagtatctgtccaacatg gacccattacagggtaaccttgacctggtttccagagggggcagtgacccagaggtcgtagagagcactagcttccgtaa gattagtggcgaagaaccaatgacggtcaggaaagaaattctagatttaagcaaagttgagacggatgtagacaaagggg agaaagacgatcatctcaaaaattccaagaaggaagaatcagaagaggatgtaaacgaatctaataagatagcatcaaat ggcaatgaaaatgctgacataaatgcagaagaaaaagtaagtgattgctttgaaaatgaaaataacagtgtgtgtgatac taacaaaaatcccaaggaaatattaactagtgtaactgatgatcaacaaagagatgactcttctaggaatgatgttaata aggaaaatagtgaaattctctctgtgaaatatgtagaaaatcttgttaatgagaccataggagaggtattcaaaagtgta gctaaagaagagcaggacgctaaatcaagaaacacgaaaatggacaatgattcggaaataagttctgaggagttagaatc atttgaaggggtgcactccgactctgaaagtgaaagtaagggaattccacaatcggatcaagatcagcagaagtccaaac tgcaggtagatgttagtttgttagagaaggaggactcgagcctgacagagggtagctgtgatactaacagtactgatgga gagaaagatagggaggaatgtagagaaaaagaaagtatttcagagcctgatagtggacataatgatgtagaacttgtaga ggctagttcagagcattccgacataagtagtggtggaataagttcaccagatcaaaaattgattttagaatttgagacga gcctgggccataattcttcatctacttctgatgtaagttcaacaacgacagagggaagttataaactgattcagtctcca gaagttgtcaaagaagatgtatgtgaagatgaagctaaacagaataaagaagatgatgataacccagaggaaattcagac caaagaaatatcggctcaaaatgaggaattgttgagtgtaatgccatcaacaacaaaaaggaaagtgaagttgaaaagta ataggaatttcagtatcagtagtgagagcatgtcatcggacgatgaggcgaagagcgacctttcacctctgggagaaatg acttctgagcttgaggcagagggtcagcgtgaagatgtgtctagtagtgttacagctatgactgataagaaagtgatatc gtttataagcgaggatttaatagacaacacagatgatgacagactgaggtcagagtcggaacagtctgtgcaggaggaac cggatagtaaaacggtacagaaagagtacttcatgaccactgctggtagaattagtgtaggatgtgaggaaggggagagg acacataatgaggacataacacagagagatgaggcattgactgaggtagggaggatcattacacatgttaatggcctgat tacacaggtcgatgcttctcttgcacattcctcagaccaaattgcacaacttgattcttcttttcctaactcacatgaac cggttccaaaggttgattccacccctgcatgttcacaagatccacccgcacacccgccttcctctctctgcatggagtca caggacactgaggggatcaaagaaactaaagtgaaaccaaacagcaatgtgatgagtactgtgacaaatactaaggagaa gttacagggggtggagttctcagaggagtggcaggatgacggggtaccggggatgcctcctaccgagaacgagtcagaca caacagagtctgacgactcgaggtcaagacacagcagtaactcaagtacaagttcaacagagcgcaaagctgagcccaaa gctggtaagttacatggaacatctcagaacgagactgaaacaaccaaatctgacgactctaggtcaatacacattagtaa ctcaagtacaagctcaacagagcacaaagctgatgacactcctgttaaatctgtggaacctctcccagaatttactgctc aggaggaatatagagagtccaggctgtggaagggtgtggaaataggcgggaaactattcaagattgacctcaaggtcata gagccttacaagagagttctctcacatggaggttactatggcgatggtctgaatgcaattattattttttcgggctgtta tcttccagacagaggaaggaaggactatcaatatgtcatggataatttatttatgtatgtgataagcactctggagactc tggtagctgaggattacatgattgtatatttccatggggccacacccagaagacaaatgcccagttttggttggctgaaa agatgttaccagatgattgataggaggttgagaaagaatttaaagtctttaatgctggtccacccaactctatggctcag aacaatagtggtgatgactagaccttttataagttccaagtttacctctaagttgaagttcgtacgtacactgaaggatc tcggtcagatacttcctatggaatacataaacgtccctgatcaagtacaacagtacgatgacaagctccctcagcaccag ccaaattcctcagcaagcaaacgagctagcaccatgtcacaaaaccctaacatgattacttccccttcctga |
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Protein
| Protein ID | pfu_aug2.0_127.1_23520.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_127.1_23520.t1 MLSSWVHLHEGDTPIHVVIGNESCDLDSVVSALTFAFYLGQISADDTIFIPVLNIQRSQYPLRTESTFFLRKNSITDELL TFRDDLDLQKLHRSGKLTLTLVDRNVLDTQDEEMETSVRRVIDHRPLERKNTDNIDITVDTVGSCCTLVAEKLLDDEKFT IDHQVAVLLYGTILVDTVNTSPEAGKTTLRDTAVLSKLRQMLSDVDGNQLYNSIQQAKNDVSGLTTVEVLEKDLKMLTEG KLKVAMSSIPLDLKDFLSRPNLANDVEAFCQKNIADVLVILTMHVDNDLPHRELAVYAGNAVYRQKIVSVLEASLDPGLE LVRFLSDSTPAFVAYTQGNVKASRKKILPIVKAFMKDMSQDGSQTDQSNNSLLDFGDFDPFSVTNSNSDKNSGADTDVAA LLSFDEMSQTADNEKRLSLAGKQESTEEADQVEETSNLPFTPKNSFCDSQFDTFYQNNTLPSLSAHDMVQKVQNKRMSLE ANDDLLGASSLLDNIPPLKPQNNVMENFDLLQTDSALQSSENVGQSCDLLDIEPKETQNIVAVEIAKEMKNENTSNIADL LDLDFTGGNDPDDSKGDKNDNTNLLDLTSGNQATTNQSTDNSDLNLNSLTSNQMLEAADLAAQEEAIRSFTKEIIQDVLE KVSSSPPEDLVDAERSLADEGKSGLLLDVNNEHTAIQRTPSANGLTVETEYLSNMDPLQGNLDLVSRGGSDPEVVESTSF RKISGEEPMTVRKEILDLSKAETDVDKGEKDDHLKNSEKEVSKEDVNKSNKIASNGNENADINAEEKVSDCFENENNSVC DTNKNPKEILTSVTDDQQRDDFSRNDVNKENSEILSVKYVENLVNETIGEVIKSVAKEEQEGKGTSDAKSRNTKMDNDSE ISSEELESFEGVHSDSESESKGIPQSDQDQQKSKLQVDVSLLEKEDSSLTEGSCDTSSTDGEKDREEYREKECISEPDSG QNDVELVEASSEHSDISSGGISSPDQKLVLEFETSLGHNSSSTSDVSSTTTEGSYKLIQSPEVVKENVCEDEAKQNKEDD DNPEEIQTKEISAQNEELLSVMPSTTKRKVKLKSNRNFSISSESMSSDDEAKSDLSPLGELTSELEAEGQREDVSSNVTA ATDKKVISFISEDLIDDADDDRLRSESEQSVQEEPDSKTVQKEYFMTTAGRISVGCEEGERTLSEDITQRDEALTEVGRI ITHVNGLITQVDASIAHSSDQIAQLDSSFPNSHEPVPKVDSTPACSQDPPAHPPSSLCMESQRIPSANGLTVETEYLSNM DPLQGNLDLVSRGGSDPEVVESTSFRKISGEEPMTVRKEILDLSKVETDVDKGEKDDHLKNSKKEESEEDVNESNKIASN GNENADINAEEKVSDCFENENNSVCDTNKNPKEILTSVTDDQQRDDSSRNDVNKENSEILSVKYVENLVNETIGEVFKSV AKEEQDAKSRNTKMDNDSEISSEELESFEGVHSDSESESKGIPQSDQDQQKSKLQVDVSLLEKEDSSLTEGSCDTNSTDG EKDREECREKESISEPDSGHNDVELVEASSEHSDISSGGISSPDQKLILEFETSLGHNSSSTSDVSSTTTEGSYKLIQSP EVVKEDVCEDEAKQNKEDDDNPEEIQTKEISAQNEELLSVMPSTTKRKVKLKSNRNFSISSESMSSDDEAKSDLSPLGEM TSELEAEGQREDVSSSVTAMTDKKVISFISEDLIDNTDDDRLRSESEQSVQEEPDSKTVQKEYFMTTAGRISVGCEEGER THNEDITQRDEALTEVGRIITHVNGLITQVDASLAHSSDQIAQLDSSFPNSHEPVPKVDSTPACSQDPPAHPPSSLCMES QDTEGIKETKVKPNSNVMSTVTNTKEKLQGVEFSEEWQDDGVPGMPPTENESDTTESDDSRSRHSSNSSTSSTERKAEPK AGKLHGTSQNETETTKSDDSRSIHISNSSTSSTEHKADDTPVKSVEPLPEFTAQEEYRESRLWKGVEIGGKLFKIDLKVI EPYKRVLSHGGYYGDGLNAIIIFSGCYLPDRGRKDYQYVMDNLFMYVISTLETLVAEDYMIVYFHGATPRRQMPSFGWLK RCYQMIDRRLRKNLKSLMLVHPTLWLRTIVVMTRPFISSKFTSKLKFVRTLKDLGQILPMEYINVPDQVQQYDDKLPQHQ PNSSASKRASTMSQNPNMITSPS |
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