Gene
| Gene Model ID | pfu_aug2.0_127.1_23521 |
|---|---|
| Locus | scaffold127.1 : 244936 ... 250879 : - |
| To GenomeBrowser | scaffold127.1:244936..250879 |
| Genes list of scaffold | scaffold127.1 |
| Synonym | pfu_aug1.0_21554.1_54766 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_127.1_23521.t1 | 2 | 1 | Sushi | 7 | 70 | 8.9e-07 | 29.1 | 6.0e-11 | 8.9e-07 | 29.1 |
| pfu_aug2.0_127.1_23521.t1 | 2 | 2 | Sushi | 141 | 146 | 8.9e-07 | 29.1 | 0.83 | 12000.0 | -3.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_127.1_23521.t1 | gi|676478611|ref|XP_009061484.1| | hypothetical protein LOTGIDRAFT_166185 [Lottia gigantea] | 3.0e-07 |
Transcript
| Transcript ID | pfu_aug2.0_127.1_23521.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_127.1_23521.t1 atgatgtccataccagaatgccctcctctcctgtccttgccaaaaaccaacacctctcacactactccggacattagtgt tagctctcagcagcgctacattggaactgaagtcacagtcacgtgtccagataactacttcatcgtaggtcatgacgtca ttacttgtctagattctcttgaatggagcgttgatagtcttccacattgtacagacgtcctatatggagttccagaatcc accaagttgtatataggagtcttctcggcttgtgccctcatagtattactgggatttgctgttgttattggaaaaattat atgcaagaacagaaaagacgaaagtccaatttcaggttatgaaagttcgtttgacgacgattcttcatatgagcaattag acacagtgacaggtcgagaatctagtggtcaatggagtttaggtagttacagtgctaatgaggaatcagagcattatagg aacagcaatttctattatccagagagacataaccatggcaacgatactacacctttctga |
|
Protein
| Protein ID | pfu_aug2.0_127.1_23521.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_127.1_23521.t1 MMSIPECPPLLSLPKTNTSHTTPDISVSSQQRYIGTEVTVTCPDNYFIVGHDVITCLDSLEWSVDSLPHCTDVLYGVPES TKLYIGVFSACALIVLLGFAVVIGKIICKNRKDESPISGYESSFDDDSSYEQLDTVTGRESSGQWSLGSYSANEESEHYR NSNFYYPERHNHGNDTTPF |
|