Gene
| Gene Model ID | pfu_aug2.0_127.1_23529 |
|---|---|
| Locus | scaffold127.1 : 424513 ... 436784 : - |
| To GenomeBrowser | scaffold127.1:424513..436784 |
| Genes list of scaffold | scaffold127.1 |
| Synonym | pfu_aug1.0_12551.1_17875 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_127.1_23529.t1 | 2 | 1 | Trichoplein | 39 | 151 | 2.2e-27 | 95.3 | 1.0 | 15000.0 | -9.4 |
| pfu_aug2.0_127.1_23529.t1 | 2 | 2 | Trichoplein | 159 | 488 | 2.2e-27 | 95.3 | 1.5e-31 | 2.2e-27 | 95.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_127.1_23529.t1 | gi|676472914|ref|XP_009059645.1| | hypothetical protein LOTGIDRAFT_204314 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_127.1_23529.t1 | gi|524866804|ref|XP_005090218.1| | PREDICTED: coiled-coil domain-containing protein 11-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_127.1_23529.t1 | gi|296434259|ref|NP_001171797.1| | coiled-coil domain-containing protein 11-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_127.1_23529.t1 | gi|260829949|ref|XP_002609924.1| | hypothetical protein BRAFLDRAFT_124363 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_127.1_23529.t1 | gi|573878264|ref|XP_006627364.1| | PREDICTED: coiled-coil domain-containing protein 11-like [Lepisosteus oculatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_127.1_23529.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_127.1_23529.t1 atgatggtatcacagagaccccgtaggacgagggaggtgacgggcccaacgccacattctgtggctatcaaagcccgtcc tccaaatgtacgaccaccagaataccttattcttgaaaggaggaagaaggaagacatgttggataattatagaaaaaata cacaatatatggaattcaatgacttaaaaaacgaatgggagcgatcaacagatagaaaaatcaaacttaataccgtgaaa agaagagtagatggtctgatgcaggtcaatcagtttacattggaagaaagaagacaaagattacgggagatgttacaagc tgaagaggcagcctatctgtatgagatggagtcaatagaagagacgacacttgaaaggcaagccaaaatgagggacagag cccggtatctcaaagacaaacgagaggatgaaagactcaaatttgtacaggaaaaatatgatcaacagttcaggaaccag tgtgaggaacttcgttcaactctgtctaaacgtcagcaggatgaggtgtgtgtagagagattagaacaactccgcataaa ggaagagatgcagagagagaaaaaacaggaagatgccatgtatgctcatctctgggaacaagatatgttagctaaagcag ccagagaagagaaggatgcagcagcagcccatgagaggaaccaggaggtgctgggtgtactgaggaaacagatggcagct ctggaggagcagaaagaggaggccaggaggctcaaggaggaggaggcacaactgctgcgtgagcagaacgcgcttcgtcg tttggaggagcagcgagcgtacgaggagaagttacgtaaccagcaggagacgagggacatgttagatctgtctcttaaga tcaagatgaagaagaaagccaaggcagagcaggaacagttggcattcgacttgaagatcctggaacagcttctggaggaa tccaggaacgaggctatggaacaactacagagaaagcgagagttaagagaggaggacaagcgatatcgtgcgtacctaaa acagttgatggaggaagaacgtgtgaaggagcgtgatctggaacgattggtcaatgaagaagtggagaagatgtggcaaa aacgtctacatcaatggcagctagagcggcaagccaggaagaagttactagaggatgtattggtggtcagagcacagcaa atacgggatagattacaaaggaatgaggtcagacagagagaagctgaaaaagagagaattgaactgatagataccatcga gagaaaccgtgcattagaggaacaacaggcgtacaaaatgtgggaaaagaacgccacctatcagagagatttggaaggac agattgagtataatcgtaaactacgtgagctggagcgtcatagagaagaagaggaattcttactgggaatgcaggcggag aaagaataccaactaagactgaaagattgtttggataactccgagtacgacaaactacaccccatgaggcgtgccgctca aaatagggctcaagtacagtaa |
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Protein
| Protein ID | pfu_aug2.0_127.1_23529.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_127.1_23529.t1 MMVSQRPRRTREVTGPTPHSVAIKARPPNVRPPEYLILERRKKEDMLDNYRKNTQYMEFNDLKNEWERSTDRKIKLNTVK RRVDGLMQVNQFTLEERRQRLREMLQAEEAAYLYEMESIEETTLERQAKMRDRARYLKDKREDERLKFVQEKYDQQFRNQ CEELRSTLSKRQQDEVCVERLEQLRIKEEMQREKKQEDAMYAHLWEQDMLAKAAREEKDAAAAHERNQEVLGVLRKQMAA LEEQKEEARRLKEEEAQLLREQNALRRLEEQRAYEEKLRNQQETRDMLDLSLKIKMKKKAKAEQEQLAFDLKILEQLLEE SRNEAMEQLQRKRELREEDKRYRAYLKQLMEEERVKERDLERLVNEEVEKMWQKRLHQWQLERQARKKLLEDVLVVRAQQ IRDRLQRNEVRQREAEKERIELIDTIERNRALEEQQAYKMWEKNATYQRDLEGQIEYNRKLRELERHREEEEFLLGMQAE KEYQLRLKDCLDNSEYDKLHPMRRAAQNRAQVQ |
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