Gene
| Gene Model ID | pfu_aug2.0_127.1_23530 |
|---|---|
| Locus | scaffold127.1 : 438625 ... 447314 : + |
| To GenomeBrowser | scaffold127.1:438625..447314 |
| Genes list of scaffold | scaffold127.1 |
| Synonym | pfu_aug1.0_16525.1_46995 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| spindle and kinetochore-associated protein 1-like isoform x1 | GO:0005694 GO:0043234 GO:0044446 GO:0044763 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_127.1_23530.t1 | 1 | 1 | DUF1395 | 97 | 255 | 4.69996e-41 | 140.9 | 4.2039e-45 | 7.09996e-41 | 140.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_127.1_23530.t1 | gi|676472917|ref|XP_009059646.1| | hypothetical protein LOTGIDRAFT_124768 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_127.1_23530.t1 | gi|524866800|ref|XP_005090216.1| | PREDICTED: spindle and kinetochore-associated protein 1-like isoform X1 [Aplysia californica] | 1.00053e-42 |
| pfu_aug2.0_127.1_23530.t1 | gi|348523427|ref|XP_003449225.1| | PREDICTED: spindle and kinetochore-associated protein 1-like isoform X1 [Oreochromis niloticus] | 3.0e-37 |
| pfu_aug2.0_127.1_23530.t1 | gi|499006796|ref|XP_004556317.1| | PREDICTED: spindle and kinetochore-associated protein 1 [Maylandia zebra] | 5.0e-37 |
| pfu_aug2.0_127.1_23530.t1 | gi|583973880|ref|XP_006782338.1| | PREDICTED: spindle and kinetochore-associated protein 1-like isoform X1 [Neolamprologus brichardi] | 5.0e-37 |
Transcript
| Transcript ID | pfu_aug2.0_127.1_23530.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_127.1_23530.t1 atggagtcctacgatgaggcgtcgtcagtactcgagaaccttactggtcagttcctgagtaagctgactgacatacgtct ggtgttagacctagcccaggctgatgatgaggaggagagggaggggtgcttccacattatagaacagtgtgtacgtgaga aagcttcccttgacaatatcatgttacagctgagactggaggtggacagacaacgcagggaactaaacagggtcaagtat cctgcctttgatcgaaacacaattcttctcatgttttcaatatggagagaaaaaacatcagaaaaagtacatgtagatga caactcctatcctccccagccattagtggaagtagcaaagaaatcaggggaaacaactacagcacagagcaagaaacaaa agatgtcaaaatctgtatatgtaccctccatggagtatatcacagtggatgactttgattcagtaccaaagtatatgaag ggaaggatcacttataacaatgtcaataatgccattgatgaactgaataaagcttacaaagagaagtacaaaatcctggg tatgaagccttcccaacttaatgatgtcaataggaaaagatatgagacgtataaacagctggaaaccaaggatactgtag cggaatatttcatagtggacggagatataaaggaattttgtaactttaagctggacagagtgggacgtaatgttttaacg atactcagacactgtggccgtatgaaagaaatcaggggtaacggacgcacacgttacgccatagtacatgtgtactga |
|
Protein
| Protein ID | pfu_aug2.0_127.1_23530.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_127.1_23530.t1 MESYDEASSVLENLTGQFLSKLTDIRLVLDLAQADDEEEREGCFHIIEQCVREKASLDNIMLQLRLEVDRQRRELNRVKY PAFDRNTILLMFSIWREKTSEKVHVDDNSYPPQPLVEVAKKSGETTTAQSKKQKMSKSVYVPSMEYITVDDFDSVPKYMK GRITYNNVNNAIDELNKAYKEKYKILGMKPSQLNDVNRKRYETYKQLETKDTVAEYFIVDGDIKEFCNFKLDRVGRNVLT ILRHCGRMKEIRGNGRTRYAIVHVY |
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