Gene
| Gene Model ID | pfu_aug2.0_1271.1_04931 |
|---|---|
| Locus | scaffold1271.1 : 80253 ... 106855 : - |
| To GenomeBrowser | scaffold1271.1:80253..106855 |
| Genes list of scaffold | scaffold1271.1 |
| Synonym | pfu_aug1.0_1371.1_36990 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1271.1_04931.t1 | 5 | 1 | PBP | 159 | 229 | 7.0e-35 | 120.0 | 4.6e-05 | 0.34 | 10.7 |
| pfu_aug2.0_1271.1_04931.t1 | 5 | 2 | PBP | 286 | 357 | 7.0e-35 | 120.0 | 7.0e-14 | 5.2e-10 | 39.3 |
| pfu_aug2.0_1271.1_04931.t1 | 5 | 3 | PBP | 545 | 637 | 7.0e-35 | 120.0 | 1.6e-07 | 0.0012 | 18.7 |
| pfu_aug2.0_1271.1_04931.t1 | 5 | 4 | PBP | 757 | 841 | 7.0e-35 | 120.0 | 1.6e-19 | 1.2e-15 | 57.6 |
| pfu_aug2.0_1271.1_04931.t1 | 5 | 5 | PBP | 890 | 910 | 7.0e-35 | 120.0 | 0.15 | 1100.0 | -0.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1271.1_04931.t1 | gi|676443519|ref|XP_009050140.1| | hypothetical protein LOTGIDRAFT_173822 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_1271.1_04931.t1 | gi|524892780|ref|XP_005102915.1| | PREDICTED: uncharacterized protein C56G2.4-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_1271.1_04931.t1 | gi|524890808|ref|XP_005101946.1| | PREDICTED: uncharacterized protein LOC101850014 [Aplysia californica] | 3.0e-23 |
| pfu_aug2.0_1271.1_04931.t1 | gi|261289747|ref|XP_002604850.1| | hypothetical protein BRAFLDRAFT_70702 [Branchiostoma floridae] | 1.0e-21 |
| pfu_aug2.0_1271.1_04931.t1 | gi|308499052|ref|XP_003111712.1| | hypothetical protein CRE_02947 [Caenorhabditis remanei] | 1.0e-16 |
Transcript
| Transcript ID | pfu_aug2.0_1271.1_04931.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1271.1_04931.t1 atggatcctcctagttgtggcaaccacaatgatttcaatgacacaaagctcgtagcactagccccttgcatattttttct cacagcaaagggtgccaccgtgtgttcacctaccaatcgtgtcactgatccaagcagatgtcttaatgaaataaaagcct tgtctgaaagcaccagccagttctggttcggaactgcttataacacacgatgttccggatcaaaggctgggaccatggag tgttcgaattaccgatcttatgtagcggacagcattgtcagccgtctagggatatctagtaaccttgaaatctttgtcga tataaagtaccattcaaatgcagggacttacagaagctgtggcagccaatacacagtgagtccctcagttaacatcagtc ttgatcccacaagtactgagcagattacaccgtgggaagctaggatggcacccacgatatcatgggaaccacataatggt acatacaccgtggtcatattgagcgtgggtgttccaatcaaccatgggatttatatcaatattccaggaaatagatttgc tgacgctgaggtgattaaggcgtataatggaccaatacattttttcacatcctttgcccaagtgtatgccttcttggtgt tcaaacagcaggacgacaatctggtcattccttctgattggactgcgaggttaagcacgcccggtttcatgcagtataat ataccatctatgatggccgcactaaacttgtctggtcctgttggtatgagttggatgagcgtcattggggatccgtatgc tgtacagtcatttattaacagtggttcgttcgacatgtgtacttatctgatccagaacggcagaatgtacacgttgcttt gtgttcatccggatgctccgattcccacgagtggtacacaagacaggcccatattacattggcaggtcatcaacatagtg aaaggtgacctatctactggtgacgtggtcatgccgtatgccggacctatgccaggggacagtacctcacattactatta cttcttactatatgaacaggcaatgaagctaaatgccagtaatatgatgggctatacagatccaccgggaggaaggtttc tcttcaacatatccggttttgttgctgacagccatttaacattgactggagcaacatggtttataaccacgcaggatgaa tatgtaagatataactacgtcacgtatcggggtcgtaaccaggacgacgtgtgtaacggtgtacaagttgaatcgtcgac ggtctgctctccggaacgtcgtgctactgatgactcgtctgcatgtttaataggaataaagactatatcagagagcacta gtcatttctggttcggttcagcatacaatacccgatgctcaggatcaaaggcattgacgatggagtgttccaatagacga tctaacatggcggatagcattgtcagtcgtcttggtatctcaaaacccaatttagacttctatttggatgtgaaatattt ttcagatgcaggaagttaccggagctgtggcaataattatccgatgagacagtcaaaaaacatcagtttagaccctagta gtgacagcaaccaaacaccctgggaaactagaatggcaccaaccataacatggacgccaccacacacaaatgacacgtat acccttatagttatggatgtaggtgtgttcatgaaccatggggtctatatcaatataccaggaaacagatttaacggcgc ggaggtattcaaagcatatcatggtccacggcagatctatacatcttttgccaacgtctatatttttatgctgttcaaac aagagcacagtcatcttagcattcccgatagctggacagagaggctgaacaacaccatgatgggttacactataccggaa atgatgacagctttaaatctgactggtcctgttgcaatgaattggatgactgttataggagatgcgtatgctgtgcagaa aatgattgacaacaatattttatatatgtgtccttaccttatacagaatgagataaagaaacataaccaaagtttcttac ctgctgatccgatgatgtctgttaacatagacctgacattttcaccatcaacgattcagttcagatcgtgttgtacagac tactctttcaacgccaatacgtttacgaccagccctttcggcttagtaaacgtgaaaaccgtggaaacccgagttactcc aggggtattgctcttaaaaagtggcccaaacttctttagaaccaatttcacaggcaccaagtatacccttctctgtgttg atccggatgtcccgtttccctctgctggcacaccagacagaccatggtatcattggcatgtaagtaacatagaggacgga gacgtgacttctggagatgcagtaatagactacacggggcccatgcctccggataacaacccccattactactactttct actatatgaacagcaaggagaacttgatatcagcaatttcaggaattacacagacccaccaggatcaagattactgttca atatatctgactttgttatggataacaatttgacattggttggagctacatggtttatagccactaacgacgaatacgca aggaattattatgcaacaagcggtggacaaagcgaggagacagtgtgtaacggagtcccagggtatggagacccatgtcc agtttcaaaggcaacacctgtgattgctacctggtgcattttgctggttaccatttgtatgataaagtggtccgacatac aatga |
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Protein
| Protein ID | pfu_aug2.0_1271.1_04931.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1271.1_04931.t1 MDPPSCGNHNDFNDTKLVALAPCIFFLTAKGATVCSPTNRVTDPSRCLNEIKALSESTSQFWFGTAYNTRCSGSKAGTME CSNYRSYVADSIVSRLGISSNLEIFVDIKYHSNAGTYRSCGSQYTVSPSVNISLDPTSTEQITPWEARMAPTISWEPHNG TYTVVILSVGVPINHGIYINIPGNRFADAEVIKAYNGPIHFFTSFAQVYAFLVFKQQDDNLVIPSDWTARLSTPGFMQYN IPSMMAALNLSGPVGMSWMSVIGDPYAVQSFINSGSFDMCTYLIQNGRMYTLLCVHPDAPIPTSGTQDRPILHWQVINIV KGDLSTGDVVMPYAGPMPGDSTSHYYYFLLYEQAMKLNASNMMGYTDPPGGRFLFNISGFVADSHLTLTGATWFITTQDE YVRYNYVTYRGRNQDDVCNGVQVESSTVCSPERRATDDSSACLIGIKTISESTSHFWFGSAYNTRCSGSKALTMECSNRR SNMADSIVSRLGISKPNLDFYLDVKYFSDAGSYRSCGNNYPMRQSKNISLDPSSDSNQTPWETRMAPTITWTPPHTNDTY TLIVMDVGVFMNHGVYINIPGNRFNGAEVFKAYHGPRQIYTSFANVYIFMLFKQEHSHLSIPDSWTERLNNTMMGYTIPE MMTALNLTGPVAMNWMTVIGDAYAVQKMIDNNILYMCPYLIQNEIKKHNQSFLPADPMMSVNIDLTFSPSTIQFRSCCTD YSFNANTFTTSPFGLVNVKTVETRVTPGVLLLKSGPNFFRTNFTGTKYTLLCVDPDVPFPSAGTPDRPWYHWHVSNIEDG DVTSGDAVIDYTGPMPPDNNPHYYYFLLYEQQGELDISNFRNYTDPPGSRLLFNISDFVMDNNLTLVGATWFIATNDEYA RNYYATSGGQSEETVCNGVPGYGDPCPVSKATPVIATWCILLVTICMIKWSDIQ |
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