Gene
| Gene Model ID | pfu_aug2.0_1271.1_04933 |
|---|---|
| Locus | scaffold1271.1 : 129466 ... 136053 : + |
| To GenomeBrowser | scaffold1271.1:129466..136053 |
| Genes list of scaffold | scaffold1271.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1271.1_04933.t1 | 1 | 1 | PBP | 193 | 266 | 2.1e-12 | 47.1 | 2.5e-16 | 3.8e-12 | 46.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1271.1_04933.t1 | gi|260834346|ref|XP_002612172.1| | hypothetical protein BRAFLDRAFT_125372 [Branchiostoma floridae] | 6.0e-20 |
| pfu_aug2.0_1271.1_04933.t1 | gi|339242985|ref|XP_003377418.1| | phosphatidylethanolamine-binding protein [Trichinella spiralis] | 9.0e-17 |
Transcript
| Transcript ID | pfu_aug2.0_1271.1_04933.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1271.1_04933.t1 atggcattaactttgaattatatctatcttgtcctttttgtcacctttttcgaaaaagcattgagtgagacggtatgttc tgacagatataacgacgatgacctgcaccaatgcctgactgagatcacaacaggagctcaggacagtgatatgttctggt tcggaactgattactccatacggtgccctgatccacacggttctctggagtgtagtaaccctatgcctcaccatcatgac agcttggtatccagactgtttggggattctgtgaatttccattccacacctcttgatagatatatcgacgttcacttcta ttctcaaaaagagataaacaaacataaccgtagttttatccctcatcatacccggatgacggtagatgtagagatcacct tctcacctccagctatagcatttacatcctgctgctcagctttctattacgatcacagagtggtcaagttgaacccgttg ggtaacagcagcgtgcgatgtggtgacgtcagaaccggggtggagccatcggtggtgctcactagactcggactgatgaa agaatcaaagatgtttaataattctctgtacaccttgctgtgtgtggacccggatgttcctactcccagcttcggcacgc ccgattttcctctcctccattggctaatatctaacatcgaagatggcgatctgccgacgggtcacgtggttatgaagtac tcaggccccgcccctctaaacaacctgggacatacctattacttcctgttgtatgaacagacaatggaactcaacgtgtc tgacttcattacctacaccaacccgactggagccaggtccctgttcaacatatctgggtttgtggaacaaaaacacctga cactagttggcgccacatacatggttgctaggagtgatgagtacgcacgttatgattacgtagagctcagaggtcgtgac ccagaagactactgcatgggaatagagggatttgctgatccatgtccccgatccagcaccatcaagctctgtcagttcag ctgtgtcctcactctgttagtgttattggcattcagaatttag |
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Protein
| Protein ID | pfu_aug2.0_1271.1_04933.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1271.1_04933.t1 MALTLNYIYLVLFVTFFEKALSETVCSDRYNDDDLHQCLTEITTGAQDSDMFWFGTDYSIRCPDPHGSLECSNPMPHHHD SLVSRLFGDSVNFHSTPLDRYIDVHFYSQKEINKHNRSFIPHHTRMTVDVEITFSPPAIAFTSCCSAFYYDHRVVKLNPL GNSSVRCGDVRTGVEPSVVLTRLGLMKESKMFNNSLYTLLCVDPDVPTPSFGTPDFPLLHWLISNIEDGDLPTGHVVMKY SGPAPLNNLGHTYYFLLYEQTMELNVSDFITYTNPTGARSLFNISGFVEQKHLTLVGATYMVARSDEYARYDYVELRGRD PEDYCMGIEGFADPCPRSSTIKLCQFSCVLTLLVLLAFRI |
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