Gene
| Gene Model ID | pfu_aug2.0_1271.1_04935 |
|---|---|
| Locus | scaffold1271.1 : 164611 ... 174590 : - |
| To GenomeBrowser | scaffold1271.1:164611..174590 |
| Genes list of scaffold | scaffold1271.1 |
| Synonym | NA |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1271.1_04935.t1 | 2 | 1 | Lectin_C | 1 | 56 | 6.0e-12 | 46.1 | 1.9e-06 | 0.029 | 15.0 |
| pfu_aug2.0_1271.1_04935.t1 | 2 | 2 | Lectin_C | 98 | 187 | 6.0e-12 | 46.1 | 7.6e-11 | 1.1e-06 | 29.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1271.1_04935.t1 | gi|542142848|ref|XP_005480519.1| | PREDICTED: macrophage mannose receptor 1-like [Zonotrichia albicollis] | 3.0e-09 |
| pfu_aug2.0_1271.1_04935.t1 | gi|543347236|ref|XP_005519172.1| | PREDICTED: macrophage mannose receptor 1-like [Pseudopodoces humilis] | 4.0e-09 |
| pfu_aug2.0_1271.1_04935.t1 | gi|686595890|ref|XP_009274011.1| | PREDICTED: macrophage mannose receptor 1-like [Aptenodytes forsteri] | 3.0e-08 |
| pfu_aug2.0_1271.1_04935.t1 | gi|449492420|ref|XP_002192626.2| | 4.0e-08 |
Transcript
| Transcript ID | pfu_aug2.0_1271.1_04935.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1271.1_04935.t1 cttttacatggatagatgggacatctgttttgtctgatttctggggatcaggattcccccaggatccacatgagaacgag tgtggaatactggcttatcgtacgctagaggacatatggatgttaatggactgggagtgcgaactggaagtcttctttat ttgtgaaaaaccagctaccctcattacaaatgaatacatcgtgaaagttgtttgtgctactctagacatatggcatcaat ttggttcaaaatgttacctgatcagctcagatgataatgactttccttacataaaaactgattgtgaaaatgacttcaac gggaaattaatggtcataaagaacggttacaaattggcctttatacaacagaagctcaatgggctaccacacgatatgga gttctttctaggactagaagttagcaatacaacctctggtaaagcctttacctggagtgacggctacctcccactatctg acttctggggtggtggttatcccgtggaccccgacaacaaccactgtgctgttctgacctacatgccatctcaggaccag tggctgatcagagactgggacgcatgggaggatacgtactatgtctga |
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Protein
| Protein ID | pfu_aug2.0_1271.1_04935.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1271.1_04935.t1 FTWIDGTSVLSDFWGSGFPQDPHENECGILAYRTLEDIWMLMDWECELEVFFICEKPATLITNEYIVKVVCATLDIWHQF GSKCYLISSDDNDFPYIKTDCENDFNGKLMVIKNGYKLAFIQQKLNGLPHDMEFFLGLEVSNTTSGKAFTWSDGYLPLSD FWGGGYPVDPDNNHCAVLTYMPSQDQWLIRDWDAWEDTYYV |
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