Gene
| Gene Model ID | pfu_aug2.0_12790.1_03136 |
|---|---|
| Locus | scaffold12790.1 : 1 ... 3784 : - |
| To GenomeBrowser | scaffold12790.1:1..3784 |
| Genes list of scaffold | scaffold12790.1 |
| Synonym | pfu_aug1.0_2468.1_01118 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_12790.1_03136.t1 | 1 | 1 | Lectin_C | 271 | 382 | 3.0e-14 | 53.5 | 3.1e-18 | 4.6e-14 | 52.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_12790.1_03136.t1 | gi|701330011|ref|XP_009977428.1| | PREDICTED: macrophage mannose receptor 1-like [Tauraco erythrolophus] | 2.0e-14 |
| pfu_aug2.0_12790.1_03136.t1 | gi|513168133|ref|XP_425982.4| | PREDICTED: macrophage mannose receptor 1-like [Gallus gallus] | 3.0e-14 |
| pfu_aug2.0_12790.1_03136.t1 | gi|694846159|ref|XP_009464093.1| | PREDICTED: macrophage mannose receptor 1-like [Nipponia nippon] | 3.0e-14 |
| pfu_aug2.0_12790.1_03136.t1 | gi|530642977|ref|XP_005308184.1| | PREDICTED: macrophage mannose receptor 1-like isoform X1 [Chrysemys picta bellii] | 4.0e-14 |
| pfu_aug2.0_12790.1_03136.t1 | gi|530642975|ref|XP_005308183.1| | PREDICTED: macrophage mannose receptor 1-like isoform X2 [Chrysemys picta bellii] | 7.0e-14 |
Transcript
| Transcript ID | pfu_aug2.0_12790.1_03136.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_12790.1_03136.t1 atcctttaaacaacagagcaaggcagagccaggagctgcgtatccaagtttcaagtcacaaagctcgggaggtggctctt cagatggaaatgtgtatccatcctttaaacaacagagcaaggtagagccaggcggagtttatccaacattcaagtcttca agtagcgtgtcaagcactggctctacagaggctcatgtgtatccaactttcaaatcacaaggaaaatcgtccggtggcag tgcaggtcgagtatatcctacattcaaatcgcagggaagttctggaggatatcttaagtcagtcaaaccagggccggtct atcccaagccaccagtacttgtaaagcctataccaagaccctaccccaaacaaccagttcttgtaaagcctataccaaga ccctaccccaaacaaccagttcttgtcaagcctttaccaagaccatatcccaaacaaccagttctggttaaacccttacc aagaccctacccaaaacaacctgttcttggaaaaccattaccaagaccctaccctaaagcgtcgccagcggtttatccaa aatcatcagtgaaatctttaccagtttcataccccaagtcaagctcttctacaggaaagtatgccccacacacctttgga tactttcccggtggagcaggaaagtatcagtccggctacttccccacctacaagcatcatggctacaactttaaagtgag ctacaagtccttcccagtcgtgcagccgagaccagcacagtgtccctttgggtggtatccttatggtggaagctgttacc tattcagcagggaaaaattggaatggtatcacgctcagatgaaatgccaatatatgggaggatcacttgctgtcattgac tctgcaaacgagaatgcatttttaaaacttgtggccaaaaagaagacaatgaatccaggagtttggattggactgaatga cgttttattccacggaagtcgccagtggttctggggttacggacataaggcatgtggcctgtttgattggttcggcaaag aaccagtctacaaaggctatcagaaacattgtgtgaccttatggggtcaatacggctacaaatggagattatttaattgt tacaggaaacttcaatacatctgtgaaatcaatccg |
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Protein
| Protein ID | pfu_aug2.0_12790.1_03136.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_12790.1_03136.t1 SFKQQSKAEPGAAYPSFKSQSSGGGSSDGNVYPSFKQQSKVEPGGVYPTFKSSSSVSSTGSTEAHVYPTFKSQGKSSGGS AGRVYPTFKSQGSSGGYLKSVKPGPVYPKPPVLVKPIPRPYPKQPVLVKPIPRPYPKQPVLVKPLPRPYPKQPVLVKPLP RPYPKQPVLGKPLPRPYPKASPAVYPKSSVKSLPVSYPKSSSSTGKYAPHTFGYFPGGAGKYQSGYFPTYKHHGYNFKVS YKSFPVVQPRPAQCPFGWYPYGGSCYLFSREKLEWYHAQMKCQYMGGSLAVIDSANENAFLKLVAKKKTMNPGVWIGLND VLFHGSRQWFWGYGHKACGLFDWFGKEPVYKGYQKHCVTLWGQYGYKWRLFNCYRKLQYICEINP |
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