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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_12803.1_13140
Locus scaffold12803.1 : 1 ... 3775 : +
To GenomeBrowser scaffold12803.1:1..3775
Genes list of scaffold scaffold12803.1
Synonym pfu_aug1.0_19269.1_03992

Manual annotation
Annotation by Blast2GO
Annotation GO
probable atp-dependent rna helicase ddx46-like GO:0000166 GO:0016787

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_12803.1_13140.t1 gi|645039017|ref|XP_008202694.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 isoform X3 [Nasonia vitripennis] 1.0e-25
pfu_aug2.0_12803.1_13140.t1 gi|645039007|ref|XP_008202676.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 isoform X1 [Nasonia vitripennis] 1.0e-25
pfu_aug2.0_12803.1_13140.t1 gi|645039021|ref|XP_008202706.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 isoform X5 [Nasonia vitripennis] 1.0e-25

Transcript
Transcript IDpfu_aug2.0_12803.1_13140.t1
Definition-
>pfu_aug2.0_12803.1_13140.t1
gagagataggagatctaggtcaaagtctacagaaaagagaaagaaaagttctacacctgagcctaatctactacatagag
aaggagagcttagagttaaggatgaacctttggataaagaggaggaacagaaacgactggagatggagatgcagaaacga
cgagatagaatagagcaatggagagcagagaggaagaagaaccaacagttacagcccattaatatagccccggtcagtaa
gaaatggtcgttagaggacgaagacgatgatgatgaagaggaggagacaaaggaatcagggggagataatgatgacgaag
ttgatccacttgatgcttttatgaatggagacaataatcctggaggaaagaaagtaacgataataacgggggtggcaaag
aagaaggtagatcctgagaaacagaaaggggagttaatggagagtaatgttgatgccatggagtactcgtcagaagagga
agaagaagacctagatacaaccatggctaaaatgaacaagaaaaag

Protein
Protein IDpfu_aug2.0_12803.1_13140.t1
Definition-
>pfu_aug2.0_12803.1_13140.t1
RDRRSRSKSTEKRKKSSTPEPNLLHREGELRVKDEPLDKEEEQKRLEMEMQKRRDRIEQWRAERKKNQQLQPINIAPVSK
KWSLEDEDDDDEEEETKESGGDNDDEVDPLDAFMNGDNNPGGKKVTIITGVAKKKVDPEKQKGELMESNVDAMEYSSEEE
EEDLDTTMAKMNKKK

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