Gene
| Gene Model ID | pfu_aug2.0_1281.1_04937 |
|---|---|
| Locus | scaffold1281.1 : 36126 ... 54688 : + |
| To GenomeBrowser | scaffold1281.1:36126..54688 |
| Genes list of scaffold | scaffold1281.1 |
| Synonym | pfu_aug1.0_18975.1_40105 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| alcohol dehydrogenase class-3 | GO:0003008 GO:0016616 GO:0043227 GO:0044237 GO:0044238 GO:0044281 GO:0044763 GO:0046872 GO:0050896 GO:0055114 GO:0071704 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1281.1_04937.t1 | 3 | 1 | ADH_N | 2 | 46 | 5.0e-09 | 35.8 | 5.7e-12 | 2.8e-08 | 33.4 |
| pfu_aug2.0_1281.1_04937.t1 | 3 | 2 | ADH_N | 87 | 114 | 5.0e-09 | 35.8 | 0.27 | 1400.0 | -1.0 |
| pfu_aug2.0_1281.1_04937.t1 | 1 | 1 | ADH_zinc_N | 157 | 287 | 3.2e-23 | 81.6 | 1.2e-26 | 5.7e-23 | 80.8 |
| pfu_aug2.0_1281.1_04937.t1 | 3 | 3 | ADH_N | 222 | 245 | 5.0e-09 | 35.8 | 0.94 | 4600.0 | -2.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1281.1_04937.t1 | gi|597763302|ref|XP_007245596.1| | PREDICTED: alcohol dehydrogenase class-3-like [Astyanax mexicanus] | 0.0 |
| pfu_aug2.0_1281.1_04937.t1 | gi|548348310|ref|XP_005726529.1| | PREDICTED: alcohol dehydrogenase class-3-like [Pundamilia nyererei] | 0.0 |
| pfu_aug2.0_1281.1_04937.t1 | gi|562846700|ref|XP_006152237.1| | PREDICTED: alcohol dehydrogenase class-3 [Tupaia chinensis] | 0.0 |
| pfu_aug2.0_1281.1_04937.t1 | gi|514766489|ref|XP_005024462.1| | PREDICTED: alcohol dehydrogenase class-3 [Anas platyrhynchos] | 0.0 |
| pfu_aug2.0_1281.1_04937.t1 | gi|746865875|ref|XP_011063978.1| | PREDICTED: alcohol dehydrogenase class-3 [Acromyrmex echinatior] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1281.1_04937.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1281.1_04937.t1 atgacacattcaagtatctgtcgttcagacctgtttggtttggctaaactgtcgcctttcacactgtttcccatcgtcct aggacatgaaggaagtggtatcgtggagagtgtaggggaaggagttgaaaaccttcagccagttatcttgttatctctgc ttcttagagcacttggacattttgattttagaaatccaaagtttaaaggcgtacagattttctcgtctgtaatgagagat ggtactagtcgttttacatgtaaaggcaaacccatatatcactatctgggactgagtacattctctgagtatacagtggt ggctgatattcaagtggcaaagataaatcccgaggcgccactagaaaaagtttgtcttctaggatgtggggtggcaaccg gatatggtgcagcactgaacacagctaaggtagaggaaggatcgacatgtgccgtatggggattaggtgccataggtttg gccgttataatgggatgtaagaaggctggggcatcacgtatcattggcatcgatgttagtcccgataagtttgtagtagc taagaagtttggaatgacagagagccttaatcccaatgattatgataaaccaatacaacaagtactgatggacatcacag acgggggactggactacgcgtttgagtgtatcggtaacgttgatgtaatgagagctgcactggaatcttgtcataaggga tggggtgtggccgttctgttaggaatcgtcggtggggataaggaagtatctaccaaaccttttcagattgtaacaggaag aacactgaaaggatcaatatatggggactggaaaagagacgatattccgaaactagtggaagcctatatgaacaaagaca tacagattgatgaatttatcacgcataataagacaatagaggaaatcaacgaagcatttgatctgttaagagccgctaaa tgcatccgaactgtaatgaccttctaa |
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Protein
| Protein ID | pfu_aug2.0_1281.1_04937.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1281.1_04937.t1 MTHSSICRSDLFGLAKLSPFTLFPIVLGHEGSGIVESVGEGVENLQPVILLSLLLRALGHFDFRNPKFKGVQIFSSVMRD GTSRFTCKGKPIYHYLGLSTFSEYTVVADIQVAKINPEAPLEKVCLLGCGVATGYGAALNTAKVEEGSTCAVWGLGAIGL AVIMGCKKAGASRIIGIDVSPDKFVVAKKFGMTESLNPNDYDKPIQQVLMDITDGGLDYAFECIGNVDVMRAALESCHKG WGVAVLLGIVGGDKEVSTKPFQIVTGRTLKGSIYGDWKRDDIPKLVEAYMNKDIQIDEFITHNKTIEEINEAFDLLRAAK CIRTVMTF |
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