Gene
| Gene Model ID | pfu_aug2.0_1281.1_04940 |
|---|---|
| Locus | scaffold1281.1 : 127856 ... 150889 : + |
| To GenomeBrowser | scaffold1281.1:127856..150889 |
| Genes list of scaffold | scaffold1281.1 |
| Synonym | pfu_aug1.0_192.1_22050 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| polycystic kidney disease protein 1-like 2-like | GO:0016020 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1281.1_04940.t1 | 4 | 1 | PLAT | 68 | 101 | 6.7e-19 | 68.3 | 3.3 | 12000.0 | -3.4 |
| pfu_aug2.0_1281.1_04940.t1 | 6 | 1 | PKD | 330 | 385 | 4.3e-13 | 48.8 | 6.8e-09 | 2.5e-05 | 23.9 |
| pfu_aug2.0_1281.1_04940.t1 | 3 | 1 | REJ | 376 | 402 | 2.0e-13 | 49.4 | 0.26 | 970.0 | -2.3 |
| pfu_aug2.0_1281.1_04940.t1 | 4 | 2 | PLAT | 411 | 446 | 6.7e-19 | 68.3 | 3.9 | 15000.0 | -3.7 |
| pfu_aug2.0_1281.1_04940.t1 | 6 | 2 | PKD | 460 | 487 | 4.3e-13 | 48.8 | 0.1 | 380.0 | 0.9 |
| pfu_aug2.0_1281.1_04940.t1 | 6 | 3 | PKD | 605 | 660 | 4.3e-13 | 48.8 | 0.051 | 190.0 | 1.8 |
| pfu_aug2.0_1281.1_04940.t1 | 3 | 2 | REJ | 724 | 753 | 2.0e-13 | 49.4 | 0.61 | 2300.0 | -3.5 |
| pfu_aug2.0_1281.1_04940.t1 | 6 | 4 | PKD | 734 | 758 | 4.3e-13 | 48.8 | 0.00011 | 0.4 | 10.4 |
| pfu_aug2.0_1281.1_04940.t1 | 4 | 3 | PLAT | 743 | 763 | 6.7e-19 | 68.3 | 0.37 | 1400.0 | -0.4 |
| pfu_aug2.0_1281.1_04940.t1 | 6 | 5 | PKD | 788 | 808 | 4.3e-13 | 48.8 | 0.0057 | 21.0 | 4.9 |
| pfu_aug2.0_1281.1_04940.t1 | 6 | 6 | PKD | 914 | 932 | 4.3e-13 | 48.8 | 0.00064 | 2.4 | 7.9 |
| pfu_aug2.0_1281.1_04940.t1 | 3 | 3 | REJ | 988 | 1213 | 2.0e-13 | 49.4 | 5.5e-17 | 2.0e-13 | 49.4 |
| pfu_aug2.0_1281.1_04940.t1 | 4 | 4 | PLAT | 1915 | 2022 | 6.7e-19 | 68.3 | 2.1e-21 | 7.6e-18 | 64.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1281.1_04940.t1 | gi|260824333|ref|XP_002607122.1| | hypothetical protein BRAFLDRAFT_68084 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_1281.1_04940.t1 | gi|260824037|ref|XP_002606974.1| | hypothetical protein BRAFLDRAFT_200753 [Branchiostoma floridae] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1281.1_04940.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1281.1_04940.t1 atgcgttttgttatcctgatgtttcggcaatgctttcaaaatttatatgatatgaaaaaccttagattagcattttttag ttgttttgtactggttaccatctttaaagatgtactgtcaaccatccagctacgttattatgaggatgaccagctgattg tatcgggtacaggggacatacaaggttcccatacagacctaggagtatacccacactggtgtctcggtgacgtcacactc tgtaaacaaggtataggtgtgtccttcctgtttaagccagcatcccgtctggataattctacatcagtcgtagtacttac tagtggtggacacacccatttctcaaacggtccttatttcctccaaaattatggtaatcagtatgaatttggcgttagta agggagctgtactttggcgtgttcgattttcacttattagtggatcttgggtgctcattcaagcgacatggaatacgtct caaggtttgactgtcgttgtcgaccatgaagaaataactgacaaaactccagaacaaagagcgtatcaaggcgggatgta tgattcattcacagatgttgtcatcggtttagacgatttgggaaatccaataactgacgaagatttgttcagcctcagag atatcactttctacgacagacctgtgatagaattgaatcaagatccctctggttatgatggacttctaggatgcatttca tcccccgatgcattttccaccagttcttctataagtcttgccgatgacctccctcagacatgtcgtattcattgcaaaac tgtgaatcaacagtatgctgtattaagtcataacatgttatgtagctgctcccatacaatggatgaatcatccgtgtctg atgatggtttgtgtgatagttctttcagagtctacagaacgtccttggtatcagacgaaggctccttcaggttgagcata gtggttatcagattgcagacgagaccatatgtaaaagcgaatgaaactgtgaagttgagtatagacacggatatcataag tcagacggaatacactttggcatttggagatggggcaacaactattacatcggaaagaaacctgttttattcttgggatc aagccggtacatacacgattagtgttactgtcactttaggtcaattcagggtatctaaccaaaccgtatttacagtggaa gatgttgatgagagtgtgaaaccggaattggtagtcatctctagccaccacatgaagacacaaatgtcaggtcaggtaca tttcacggtatttgatgaagaagatacaacatgtgacatagatattaatgatggctcgccacagagacaattcaattcac tgaggagctatattgaacagaagcaattcgatcatgattatccaacatttggaagatatgcattgaaatcaacttgtcaa aacagaattggatcaactcagaatgaaacttatttcttatcgaagaaatttgaaattccattcgagtatcacaatttaga ggagactttaccaattgatgttgcaggaggaaagtctttcattgaacagctaaaaataaaacgcgtctctcattcaggtt actctgagcaggttgttcagcacactgaatccggcataattatcaactcttctacgattcacccctttgaaaatctgttc atagtagaagctaatgatgaggtacttttgagacgaagaattcatgctcaaggattatttcagaaagcatcagtagttcc ttcagtaagaaatcaggcacgccagttgatatcaaatttatctgtccaagtaccaccgggaaataacttgtttgtgaatg tatcgtttggcagagattctccccgtttgctatatgtatacgaggcaaatcaaacacagtcaattgattttgaggttgac tttccagacctaggctactatccaatacaggtcatggcgtctaacgatcttatgacgaactctgctaacgacttgatttc tgtagaggttcccattatatcaatatcgcttgtgacacacaatatcacggacaaaactcaacctgtgattctatatatcg atctcaacatgggagaggaaggtcctgataaagtaagcttcataatagacagagatgatggacactctgacttcattgat tacagaagcttttcacacaatttcactacatttcaaaatagctatatctacagtgactgggggatatataccatacgtgt tactgcaaaaaacacagtaagtagagtaacggcatacattttggttcaagttggacagaacctcacccatgtagacttac aaacatcctcaatgtcacgttttacgacagatgattatgctgaatttaatataacaattgataccggaaccgatgtcaca tacagtgtagaattcggggatggagacaggtttatttttactgacattgaattagctcttggtactgtccacgcaaattc gtcgttagataatgacattgcaaatcacagcgaaataacaacattatcagggaacgagctacatgatgatcatactattg agcctcaatttgagtccttaacttcaaccattgcttctattgtaatgaatgcacttacaagtacagacagcaatgtgaaa tcaactactcaaacattccaaaacagggagaaacgtagcattgattacagaccagggtcgtttgccactagactgtcaga ggacgtgatcaaaattcgccatttgtacaaaagaccaggtgcatatcgagtcagtgtaaatgttcataacgcatttactt ctcgttatgcaactctttgctcatcctttctagtcgatgacacggatgcaagttcatgtgttgaaccagatgtccagctt ttgaatcgtgatacctcgtttaatgacccgtatgttaatattcgctctagggagataaatattacaataaatgctaactc taactgtggagtaggcaatgattatctgcactcatggaaagctgtcaaatattttggaacgcgggaaagaccaatagatg aaatatgcgaggatgaaagtgaatcaaatgttttcgtgttaccagcgttgcttttatggtacggaaaatataggatagac gtcacggttgctgcctccgggtatcgcttgaggtccacaaagaagtcattctttttggagattgtcccctcatatcctta tgctatcatcagcggagaagaagaagtgtcgtttctcgtgtacggtagcgtgtcattcaacttacgttactcaagggatc cagaccttatacaaaacgagaaagagggaattagatatgatttattttgttctcaaagagatgaattctcatcaatcgtg agtgataacttacagactgtgatacaaaagtcccgtcaattattcaatggttcgattgcacaggacaagcaagtcacacc tctgaagttatacgaatttggtgaatgtttccaaaataatggtaatttttctagtgatataatacttggaaatggaattc tgtccttcccagcagagtcattaacagattcagtagcagattttactttcaagttattcgtgacgaaaaatggacgatca aatagtacagtccagcatatcaaaatcaaactgacaaattcgtcgagtgcagacgatatgttgaacgctctagacaatat tcaggatgcagcagggatgttgagggctatctcagccattaagggcgatatattgggcggaggagataacagcacagagg cttcggaagcagccactgaggctaaggaaaaaatgctgggttcccttgatcgtgtctcagatacagcaaatgacattggt atagtaaacaaccttaacgtgatcgttacagacctgacgtctgatccaacccaaaacagcccagcctcaagaacctcaag cggaaatgccattcaaaagggcattaataccatgtcagaaaaatttggaggcgaaagcatgtcaaatgttgctgattgtt cgcagaatgctttaaagggtataagtaattccctcccaaaagaggacacggaaaccgcagagagcgcccggcgacggaac aaacgcaccatcatcgagaatccacttccaggagtaggagtggaaccggaaatggatttatatgacagaattctggagga agaagatctttatcataataaattcattgatgaattctatgaatatgtattcgtgtttccgaaggcattcagagacgctg tacggaagtacaacactctgatgtggctaccgatggacgttttaaaatggccgaaggaggacgttttcagaaaatattct gttgaatgggaaccctttgatattgacgaatacattaattactactgtaaaatagagaaggcaagattggatcaggaaag acttaatgcggataggaacgtagctgaagcctcaggaggtgcgatcggaagtatgggaaatctcatgttaggtaaaatgg aaaaggctcggaggcgcagaaaaaggagagccttgattggtaacggaaccgaggcagaagctgctgctgatgaggacgtt gaggatgttgaccaggcactgcagttaaaggccgataatttagaacttcaactcgaaaacatcgaccctgactccacaga aactgaaaagacaatggggtcagacaaaggagggatcaaactaccaatgagctctctaccgaaatcatcagatggatgtg gtgttggaacatctcttaccgtgaacaatgataatccgtatacatacgtcgaacaacctcccaaagcaagtgtggtatct ttggattttgtcgatccttgtaacccaggaggaggaaaccttccgagtgcaaacagttccgaaccaatggaaatctctat cacgggtgatcctaacggtatggcaccacctgcagaatttgttctgtgcgtaagaaggggggatacaattacagatgcca ctaactggaattatcactcggtgacactggatgccaacgacacaaccatacacttcctgttgtttcctgagagacccgaa gacagactcatggtttatatgaagtacgagggatatcctaacgccacctactatgactacaagacaacaattccacacga gatagaggattttcctccaccactaccaaatgatcctaatatatttgaaaacatgcgccatgcattcttccctccacagg aactgacagctctcaatggtacctacaaaattggagtcggactttcaaagaccgaggttgattttgattcatcaacaact tgccttaattacacgacccaaactcttattacgagttgtaaaatattgaatcctgaaacggaaaaatttgaaaacagagg atgtcttgtggcaaatacgacgacaaaatggcgaacacaatgtatctgttatcctgagccaccggaaccggaaacaacaa caactacaatggctccgacaacagaggaacaacctttcataagaaacagtaaaaagagtagagtggcatctaagacgtct ttcggtggcgacttcgtggcaccaccaaatactattgactttgccaatgtatgggccaagtttaagaaccttagcgagaa tgccgctgtattttctactgtcatagtcctgattggactctacgtcattttactgatatggtcaaggcatgaggataaaa aagatctcctaaagtggggagcaactcctctggaggacaatttacccagcgacaactatcactatcaaatcacagtaaat acaggatctaagaaaaaagcaggaaccaaatccaaagtgagctttattttatctggggagcactgtgacactggtgtcag acgtatgtacgatggacataagcaggagttcgggaaaggaagcattctgaatttcatactgagtgtggagaatgccctag gaccgctaacattcatgcgtatatggcacgacaatagcggtaagggtaaactgaagtcctggttcctggaacaagtcatg gtggccgatctacagacaggggaaagatttatatttctatgtgggcgttggctagccgtagaggaggatgatggtatggt agataggatcctccctgtagcaggccttgaagatctggctgcatttaaacaactgttcaactcaaatctcagaaagaaga tcacaagtgatcatctgtggttctccgtgttttctagaccgaccaagagtaattttaccagagctcagagaatttcctgt tgcatgtctttgctattcatgacaatgataacaaatgcaatgtggtttaagggagagaatgacgacaagaccgataactc ccagaccctgaaatttggacctgtgtcattctcaatgcagcaggaataa |
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Protein
| Protein ID | pfu_aug2.0_1281.1_04940.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1281.1_04940.t1 MRFVILMFRQCFQNLYDMKNLRLAFFSCFVLVTIFKDVLSTIQLRYYEDDQLIVSGTGDIQGSHTDLGVYPHWCLGDVTL CKQGIGVSFLFKPASRLDNSTSVVVLTSGGHTHFSNGPYFLQNYGNQYEFGVSKGAVLWRVRFSLISGSWVLIQATWNTS QGLTVVVDHEEITDKTPEQRAYQGGMYDSFTDVVIGLDDLGNPITDEDLFSLRDITFYDRPVIELNQDPSGYDGLLGCIS SPDAFSTSSSISLADDLPQTCRIHCKTVNQQYAVLSHNMLCSCSHTMDESSVSDDGLCDSSFRVYRTSLVSDEGSFRLSI VVIRLQTRPYVKANETVKLSIDTDIISQTEYTLAFGDGATTITSERNLFYSWDQAGTYTISVTVTLGQFRVSNQTVFTVE DVDESVKPELVVISSHHMKTQMSGQVHFTVFDEEDTTCDIDINDGSPQRQFNSLRSYIEQKQFDHDYPTFGRYALKSTCQ NRIGSTQNETYFLSKKFEIPFEYHNLEETLPIDVAGGKSFIEQLKIKRVSHSGYSEQVVQHTESGIIINSSTIHPFENLF IVEANDEVLLRRRIHAQGLFQKASVVPSVRNQARQLISNLSVQVPPGNNLFVNVSFGRDSPRLLYVYEANQTQSIDFEVD FPDLGYYPIQVMASNDLMTNSANDLISVEVPIISISLVTHNITDKTQPVILYIDLNMGEEGPDKVSFIIDRDDGHSDFID YRSFSHNFTTFQNSYIYSDWGIYTIRVTAKNTVSRVTAYILVQVGQNLTHVDLQTSSMSRFTTDDYAEFNITIDTGTDVT YSVEFGDGDRFIFTDIELALGTVHANSSLDNDIANHSEITTLSGNELHDDHTIEPQFESLTSTIASIVMNALTSTDSNVK STTQTFQNREKRSIDYRPGSFATRLSEDVIKIRHLYKRPGAYRVSVNVHNAFTSRYATLCSSFLVDDTDASSCVEPDVQL LNRDTSFNDPYVNIRSREINITINANSNCGVGNDYLHSWKAVKYFGTRERPIDEICEDESESNVFVLPALLLWYGKYRID VTVAASGYRLRSTKKSFFLEIVPSYPYAIISGEEEVSFLVYGSVSFNLRYSRDPDLIQNEKEGIRYDLFCSQRDEFSSIV SDNLQTVIQKSRQLFNGSIAQDKQVTPLKLYEFGECFQNNGNFSSDIILGNGILSFPAESLTDSVADFTFKLFVTKNGRS NSTVQHIKIKLTNSSSADDMLNALDNIQDAAGMLRAISAIKGDILGGGDNSTEASEAATEAKEKMLGSLDRVSDTANDIG IVNNLNVIVTDLTSDPTQNSPASRTSSGNAIQKGINTMSEKFGGESMSNVADCSQNALKGISNSLPKEDTETAESARRRN KRTIIENPLPGVGVEPEMDLYDRILEEEDLYHNKFIDEFYEYVFVFPKAFRDAVRKYNTLMWLPMDVLKWPKEDVFRKYS VEWEPFDIDEYINYYCKIEKARLDQERLNADRNVAEASGGAIGSMGNLMLGKMEKARRRRKRRALIGNGTEAEAAADEDV EDVDQALQLKADNLELQLENIDPDSTETEKTMGSDKGGIKLPMSSLPKSSDGCGVGTSLTVNNDNPYTYVEQPPKASVVS LDFVDPCNPGGGNLPSANSSEPMEISITGDPNGMAPPAEFVLCVRRGDTITDATNWNYHSVTLDANDTTIHFLLFPERPE DRLMVYMKYEGYPNATYYDYKTTIPHEIEDFPPPLPNDPNIFENMRHAFFPPQELTALNGTYKIGVGLSKTEVDFDSSTT CLNYTTQTLITSCKILNPETEKFENRGCLVANTTTKWRTQCICYPEPPEPETTTTTMAPTTEEQPFIRNSKKSRVASKTS FGGDFVAPPNTIDFANVWAKFKNLSENAAVFSTVIVLIGLYVILLIWSRHEDKKDLLKWGATPLEDNLPSDNYHYQITVN TGSKKKAGTKSKVSFILSGEHCDTGVRRMYDGHKQEFGKGSILNFILSVENALGPLTFMRIWHDNSGKGKLKSWFLEQVM VADLQTGERFIFLCGRWLAVEEDDGMVDRILPVAGLEDLAAFKQLFNSNLRKKITSDHLWFSVFSRPTKSNFTRAQRISC CMSLLFMTMITNAMWFKGENDDKTDNSQTLKFGPVSFSMQQE |
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