Gene
| Gene Model ID | pfu_aug2.0_1284.1_14931 |
|---|---|
| Locus | scaffold1284.1 : 63169 ... 79705 : - |
| To GenomeBrowser | scaffold1284.1:63169..79705 |
| Genes list of scaffold | scaffold1284.1 |
| Synonym | pfu_aug1.0_10574.1_24762 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| mediator of rna polymerase ii transcription subunit 17 | GO:0006366 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1284.1_14931.t2 | 1 | 1 | Med17 | 30 | 457 | 0.0 | 249.1 | 0.0 | 0.0 | 248.6 |
Transcript
| Transcript ID | pfu_aug2.0_1284.1_14931.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1284.1_14931.t1 atggcaaccggtgcgattccggcggctccagccgtaaatgtttgcgttgaagctgtacttgagagccaaattcaagaagt cagagtagttgaaaaacaagaagctcaagatggtcaagaaatacaggaaatatatgccccgcctttgtctatgtcagaga atctcacaaagttagcccagaagatagatttctataaagatgagagcggcgagaagggaaagcccacctccgagggcgag aaggaaagagaagaggagaaatctgtggctgcctttcagccctccctgtggccttgggactctgtcagaaataaactcaa aactgcctacacagagatgagcgtactgttggatgtgttgaacatagctaaggagaaacgttacatggttttagactcgg tgcagcagagctcgcctgatgctaagcttcccctacaactcatgtcaaagaaaaaacagacagggtatactggctcaaac atatcgccaccgatctatcaatatgagggatttcgagtcgccctcaattcagcatctaccatcttgctagccggggcaga acgtctcaaaaagtcacaggcagagaacagcaacaaaagtgattttcactttgagctgctgaaattacggcagaactgga gactaaaaaagtctggaaacacaatattaggagatcttagctacagatcagttggatctcgttaccctcataacagcaca tttgaggttgtaaagagtacggaccttgtcggagaatcaggagagacaactcctacatccacacctcgcggaagtctgga ggtgatcataccgagcgagctggagggaacggcttatatacaagtagaggtcaaatctgtaccagaatctctggatttaa ctggagctattttaaaaatgcccagtgggctgggggcggttcacacgtactggcaacaaaagctggaagtggcacagaat gtactgttctgtaaagagatatttgcacagttggcaagagaggccgttcagtcaaagtcatcagtaccccacctggtggt gggtaaccaaattatcacaaacatctttccaggcatacaactgtccattgttctctgtcattctacaggaaaagagaaag acagaaaaatacctatgtctcctggtaaactcgaccataaccatgtgttagaacactcattacatcagctgttacgtgaa gtccataataagaatctccgattcccggctccacatcctgtgactgccatggtgggagtcagtaaaaaaagacgtctagc aggaccgaatgctctaagtaggcgagaacttgtagaaatgacagaaagtgacaccatgttgaatcaaatcataaaacaga ccaagcataatgtactgagattaaggacacttcagacaatagatgcctttgccacgaccttaaatgaccctcaactgacc actcactggagttgtgctaataatagtttagaggccagctgtagggtgtttataacatcacagggatatgatctgagaat ttggcatagttttgtgctgatgattggagtagacagtataaaaatagcacacaaagacgggaggatatttaacttatcgt ttgaggagaaagaattacaggactttattctgtggcagatagcccagcaccagacgagcgtgtcacagaacttggcacgt atgatgggatggcagatcatgagtacgtgtgctgcactgggcgtgtccgacctggaggacactggcattgcatcatctct attattagcttctcccgatcatgacagagttcttgctgttaaaagtggaccaagtagcggagttaaggtgtttgtgcaat cttctcaaaaagacactaacggtaaaacccagactttgtcagcagataataagtggcagtatataggagccgactttaag gaagtcgatctgtcaaagtttgaaggaaaaaattttgcatcaaaacttgaactgttgatggcaacattgtcaagaagtgt gtcatag |
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| Transcript ID | pfu_aug2.0_1284.1_14931.t2 |
| Definition | - |
>pfu_aug2.0_1284.1_14931.t2 atggcaaccggtgcgattccggcggctccagccgtaaatgtttgcgttgaagctgtacttgagagccaaattcaagaagt cagagtagttgaaaaacaagaagctcaagatggtcaagaaatacaggaaatatatgccccgcctttgtctatgtcagaga atctcacaaagttagcccagaagatagatttctataaagatgagagcggcgagaagggaaagcccacctccgagggcgag aaggaaagagaagaggagaaatctgtggctgcctttcagccctccctgtggccttgggactctgtcagaaataaactcaa aactgcctacacagagatgagcgtactgttggatgtgttgaacatagctaaggagaaacgttacatggttttagactcgg tgcagcagagctcgcctgatgctaagcttcccctacaactcatgtcaaagaaaaaagccctcaattcagcatctaccatc ttgctagccggggcagaacgtctcaaaaagtcacaggcagagaacagcaacaaaagtgattttcactttgagctgctgaa attacggcagaactggagactaaaaaagtctggaaacacaatattaggagatcttagctacagatcagttggatctcgtt accctcataacagcacatttgaggttgtaaagagtacggaccttgtcggagaatcaggagagacaactcctacatccaca cctcgcggaagtctggaggtgatcataccgagcgagctggagggaacggcttatatacaagtagaggtcaaatctgtacc agaatctctggatttaactggagctattttaaaaatgcccagtgggctgggggcggttcacacgtactggcaacaaaagc tggaagtggcacagaatgtactgttctgtaaagagatatttgcacagttggcaagagaggccgttcagtcaaagtcatca gtaccccacctggtggtgggtaaccaaattatcacaaacatctttccaggcatacaactgtccattgttctctgtcattc tacaggaaaagagaaagacagaaaaatacctatgtctcctggtaaactcgaccataaccatgtgttagaacactcattac atcagctgttacgtgaagtccataataagaatctccgattcccggctccacatcctgtgactgccatggtgggagtcagt aaaaaaagacgtctagcaggaccgaatgctctaagtaggcgagaacttgtagaaatgacagaaagtgacaccatgttgaa tcaaatcataaaacagaccaagcataatgtactgagattaaggacacttcagacaatagatgcctttgccacgaccttaa atgaccctcaactgaccactcactggagttgtgctaataatagtttagaggccagctgtagggtgtttataacatcacag ggatatgatctgagaatttggcatagttttgtgctgatgattggagtagacagtataaaaatagcacacaaagacgggag gatatttaacttatcgtttgaggagaaagaattacaggactttattctgtggcagatagcccagcaccagacgagcgtgt cacagaacttggcacgtatgatgggatggcagatcatgagtacgtgtgctgcactgggcgtgtccgacctggaggacact ggcattgcatcatctctattattagcttctcccgatcatgacagagttcttgctgttaaaagtggaccaagtagcggagt taaggtgtttgtgcaatcttctcaaaaagacactaacggtaaaacccagactttgtcagcagataataagtggcagtata taggagccgactttaaggaagtcgatctgtcaaagtttgaaggaaaaaattttgcatcaaaacttgaactgttgatggca acattgtcaagaagtgtgtcatag |
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Protein
| Protein ID | pfu_aug2.0_1284.1_14931.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1284.1_14931.t1 MATGAIPAAPAVNVCVEAVLESQIQEVRVVEKQEAQDGQEIQEIYAPPLSMSENLTKLAQKIDFYKDESGEKGKPTSEGE KEREEEKSVAAFQPSLWPWDSVRNKLKTAYTEMSVLLDVLNIAKEKRYMVLDSVQQSSPDAKLPLQLMSKKKQTGYTGSN ISPPIYQYEGFRVALNSASTILLAGAERLKKSQAENSNKSDFHFELLKLRQNWRLKKSGNTILGDLSYRSVGSRYPHNST FEVVKSTDLVGESGETTPTSTPRGSLEVIIPSELEGTAYIQVEVKSVPESLDLTGAILKMPSGLGAVHTYWQQKLEVAQN VLFCKEIFAQLAREAVQSKSSVPHLVVGNQIITNIFPGIQLSIVLCHSTGKEKDRKIPMSPGKLDHNHVLEHSLHQLLRE VHNKNLRFPAPHPVTAMVGVSKKRRLAGPNALSRRELVEMTESDTMLNQIIKQTKHNVLRLRTLQTIDAFATTLNDPQLT THWSCANNSLEASCRVFITSQGYDLRIWHSFVLMIGVDSIKIAHKDGRIFNLSFEEKELQDFILWQIAQHQTSVSQNLAR MMGWQIMSTCAALGVSDLEDTGIASSLLLASPDHDRVLAVKSGPSSGVKVFVQSSQKDTNGKTQTLSADNKWQYIGADFK EVDLSKFEGKNFASKLELLMATLSRSVS |
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| Protein ID | pfu_aug2.0_1284.1_14931.t2 |
| Definition | - |
>pfu_aug2.0_1284.1_14931.t2 MATGAIPAAPAVNVCVEAVLESQIQEVRVVEKQEAQDGQEIQEIYAPPLSMSENLTKLAQKIDFYKDESGEKGKPTSEGE KEREEEKSVAAFQPSLWPWDSVRNKLKTAYTEMSVLLDVLNIAKEKRYMVLDSVQQSSPDAKLPLQLMSKKKALNSASTI LLAGAERLKKSQAENSNKSDFHFELLKLRQNWRLKKSGNTILGDLSYRSVGSRYPHNSTFEVVKSTDLVGESGETTPTST PRGSLEVIIPSELEGTAYIQVEVKSVPESLDLTGAILKMPSGLGAVHTYWQQKLEVAQNVLFCKEIFAQLAREAVQSKSS VPHLVVGNQIITNIFPGIQLSIVLCHSTGKEKDRKIPMSPGKLDHNHVLEHSLHQLLREVHNKNLRFPAPHPVTAMVGVS KKRRLAGPNALSRRELVEMTESDTMLNQIIKQTKHNVLRLRTLQTIDAFATTLNDPQLTTHWSCANNSLEASCRVFITSQ GYDLRIWHSFVLMIGVDSIKIAHKDGRIFNLSFEEKELQDFILWQIAQHQTSVSQNLARMMGWQIMSTCAALGVSDLEDT GIASSLLLASPDHDRVLAVKSGPSSGVKVFVQSSQKDTNGKTQTLSADNKWQYIGADFKEVDLSKFEGKNFASKLELLMA TLSRSVS |
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