Gene
Gene Model ID | pfu_aug2.0_1287.1_24841 |
---|---|
Locus | scaffold1287.1 : 155235 ... 158465 : - |
To GenomeBrowser | scaffold1287.1:155235..158465 |
Genes list of scaffold | scaffold1287.1 |
Synonym | pfu_aug1.0_8032.1_09686 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_1287.1_24841.t1 | 1 | 1 | p25-alpha | 41 | 104 | 4.8e-17 | 62.6 | 7.2e-21 | 5.3e-17 | 62.4 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_1287.1_24841.t1 | gi|706133656|ref|XP_010200717.1| | PREDICTED: tubulin polymerization-promoting protein family member 2-like [Colius striatus] | 2.0e-18 |
pfu_aug2.0_1287.1_24841.t1 | gi|91092976|ref|XP_967368.1| | PREDICTED: TPPP family protein CG45057 [Tribolium castaneum] | 2.0e-18 |
pfu_aug2.0_1287.1_24841.t1 | gi|507714229|ref|XP_004648150.1| | PREDICTED: tubulin polymerization-promoting protein family member 2 [Octodon degus] | 4.0e-18 |
pfu_aug2.0_1287.1_24841.t1 | gi|632978154|ref|XP_007905750.1| | PREDICTED: tubulin polymerization-promoting protein family member 3-like [Callorhinchus milii] | 5.0e-18 |
pfu_aug2.0_1287.1_24841.t1 | gi|602628377|ref|XP_007421125.1| | PREDICTED: tubulin polymerization-promoting protein family member 3 isoform X1 [Python bivittatus] | 1.0e-17 |
Transcript
Transcript ID | pfu_aug2.0_1287.1_24841.t1 |
---|---|
Definition | - |
>pfu_aug2.0_1287.1_24841.t1 atgggcaatcggtgcctacttaggacgaccatctgccacgccagtagcatacggtgtggttatccggattacgtgcgcac aaccctcccattttccgattacccagaagtctcgaggaacgcagaacctacgaacaagaaggccagtgatgctacagccc gtctaacggatacgaaaaagtatactggcgcccacaaagagcggtttgacgcagagggcaaaggaaagggtgccgagggc agaacggacaaagctgacaacagtggatatgtaggaaattacaaaggtgcaggaacatatgacgctaaaaaataa |
Protein
Protein ID | pfu_aug2.0_1287.1_24841.t1 |
---|---|
Definition | - |
>pfu_aug2.0_1287.1_24841.t1 MGNRCLLRTTICHASSIRCGYPDYVRTTLPFSDYPEVSRNAEPTNKKASDATARLTDTKKYTGAHKERFDAEGKGKGAEG RTDKADNSGYVGNYKGAGTYDAKK |