Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_12870.1_03140
Locus scaffold12870.1 : 1 ... 3728 : +
To GenomeBrowser scaffold12870.1:1..3728
Genes list of scaffold scaffold12870.1
Synonym pfu_aug1.0_1987.1_29935

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_12870.1_03140.t1 gi|676427493|ref|XP_009044965.1| hypothetical protein LOTGIDRAFT_136300, partial [Lottia gigantea] 2.0e-38
pfu_aug2.0_12870.1_03140.t1 gi|676463165|ref|XP_009056508.1| hypothetical protein LOTGIDRAFT_232925 [Lottia gigantea] 5.0e-26
pfu_aug2.0_12870.1_03140.t1 gi|676463162|ref|XP_009056507.1| hypothetical protein LOTGIDRAFT_120296 [Lottia gigantea] 5.0e-25
pfu_aug2.0_12870.1_03140.t1 gi|585704325|ref|XP_006823430.1| PREDICTED: choline transporter-like protein 2-like [Saccoglossus kowalevskii] 5.0e-21
pfu_aug2.0_12870.1_03140.t1 gi|195999120|ref|XP_002109428.1| hypothetical protein TRIADDRAFT_53446 [Trichoplax adhaerens] 6.0e-20

Transcript
Transcript IDpfu_aug2.0_12870.1_03140.t1
Definition-
>pfu_aug2.0_12870.1_03140.t1
catttagatatggagacccgcgactgttgatatacccagttaactccgataatgaagtttgtggctacggcaaacaagtg
ggcaagccgtacttacatttctttgacatgatagaatgtggcaagatggggataggtgtctttgtgaatggatgtcccac
acctcaggtttgtgtttctgaatgtcccacagagaattgggtgtacatcgatactataagcacagcatctgatcttaagt
tctgcaaggactctatcaacccagctacatcttctaagagtgtactgaacttagtcaaggatgaagattgtgctaggtac
accctgaaaagtaaatcattgataaacagatgtgtaccggagatcctgactgacttccttgagggcgcggccagcctggc
ggaggggctcagtaacagtaatgttaatgccacgtcagcgagcggctctgattacagcgtgtcagaaatagaatctggac
taga

Protein
Protein IDpfu_aug2.0_12870.1_03140.t1
Definition-
>pfu_aug2.0_12870.1_03140.t1
FRYGDPRLLIYPVNSDNEVCGYGKQVGKPYLHFFDMIECGKMGIGVFVNGCPTPQVCVSECPTENWVYIDTISTASDLKF
CKDSINPATSSKSVLNLVKDEDCARYTLKSKSLINRCVPEILTDFLEGAASLAEGLSNSNVNATSASGSDYSVSEIESGL

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495