Gene
| Gene Model ID | pfu_aug2.0_1288.1_28185 |
|---|---|
| Locus | scaffold1288.1 : 8936 ... 73973 : + |
| To GenomeBrowser | scaffold1288.1:8936..73973 |
| Genes list of scaffold | scaffold1288.1 |
| Synonym | pfu_aug1.0_3403.1_59222 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1288.1_28185.t1 | 2 | 1 | Miro | 189 | 249 | 1.2e-08 | 35.4 | 1.1e-06 | 0.0016 | 18.9 |
| pfu_aug2.0_1288.1_28185.t1 | 4 | 1 | Death | 250 | 279 | 1.1e-08 | 34.6 | 0.25 | 370.0 | 0.9 |
| pfu_aug2.0_1288.1_28185.t1 | 2 | 2 | Miro | 336 | 376 | 1.2e-08 | 35.4 | 5.4e-05 | 0.081 | 13.4 |
| pfu_aug2.0_1288.1_28185.t1 | 4 | 2 | Death | 386 | 406 | 1.1e-08 | 34.6 | 8.3 | 12000.0 | -4.0 |
| pfu_aug2.0_1288.1_28185.t1 | 4 | 3 | Death | 841 | 890 | 1.1e-08 | 34.6 | 1.6e-06 | 0.0024 | 17.5 |
| pfu_aug2.0_1288.1_28185.t1 | 4 | 4 | Death | 934 | 1006 | 1.1e-08 | 34.6 | 0.00029 | 0.43 | 10.3 |
Transcript
| Transcript ID | pfu_aug2.0_1288.1_28185.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1288.1_28185.t1 atggcgtcgggtggtccagaagtagatgaagaggaagtaaactatttacgattctcaattggagttttaaaagtgacacc tcaagttctaagacttgttttcaataatcgacatccagatttgaaaacctttttagcgcaaaacaaaagtaaatgtcaac aattacggaattcacgtgtactgacgatggaccagtggaatcgactctacccggccacagggacagcattactcggtgac tttgatatcaacttacttttcattctactgagaaatctgtcgaacattacccctcattcgtcaggatggaataaggatcc tcttccaagtgatacctcaataggagcagacctattacgtttgaggaggatacggaatgaacatatccacggtgtgaaca tgaggatgaccagcatcgactttggaaagaaatggtcggatttgacaatggaaaagatcagtagagagaggatgattcca ccagagattcaagcaatggatgatcggtccatggaattatttatcaatgcattgaaaaaaggaacatacaaatcttatct tatccgcgtcatgctcgttggctattatggagtcggaaaaacaactcttagtaaaaaactactagggcttgactttgatc ctagcatttatgagagcactgaaggaattgaaatacatgtaggtcattgcaatatgcaccaagaaacaggacagtggacg aaaggagaaaacgaaaatacgaaatctttagccaaaagtctaagagaacacggggtaattgacgatatgaaaaaggaagc gaagaagaggaagacagatgttgacgacattagaatgattaaggtagaaaattccgatgaagaagatgttgacattagaa tgattaaagtagaaacttccgatgcagaagcaaaagcagaaaacatgaaagaagaattgaagaatggagaaattctactg aaggaaataattgagcctgaaccatcgaccgtacatgatcgagatatgtcaaaatacacaagaatacaagtatgggactt tggaggtcagagcaactactgcaccacgcatcagtccttcctctcccaaagagctatctacctactgctgtttgatattt ctaggaaccttgacgaagatgttgaggacaaggatcttgatccatcggaaagaaaaaagtctacagtaaaagatttttta tcattctggataaattctataaagacttacgttgggactggaaagactgatcctgcacaaattttagtcgtaggaaccca tctcgacagagtagaaaagcatgaaagacataaaagagtgcaagattatatgttaagtattcgtcaagcttttgcaaagg agattgctgataaccaggtccttattgacgagagattgatgtttggcttccatgaagaggataatattgaaatcctaaaa gatgcaattgtccaaacagcagaaaaacagtcatattggggtgaagatcttccaaaatcatggattccctttcagcatca tattttggatattcgacaaaaaggagaagaaattctttcaatggatgacatacaaagtttcaatcagtcattacctgttt cgcttgatccagagaacattgacttatgtctccgatttctacattcctgtggatcaatcatattctatccggaggatatt ctttcgagatttatcatactggaaccaaagctgttagttgacacgttgcggtctttgatcacatgtgaacagttttgcta tcaaggttcaagacaagaagcatacaaaggtttgaaacaagacggtatgatcagcaaagagcgaatcaatgaaatatgga atcttcagccattttcaactctcgtgacttacaaagactacctcttgctagtaatggagaggatggacctaatagcaaaa cctgtagcctatcagaatggatctattattgattccaagttctacttcattccttcgatggcaaaggaatctttagagaa agagaagtggatggtgacgatttcaatctgcaagagagtacatacggtctttgtagactttagcaagagttttctgtctc cagctgtttattaccgactcctcagcagctgcatctgtatctggccggtcaaccatggcaagctgtactttgggtgctgt caactcaaactagatccaatgcacaagttacttatcaggatgaaaggagacaaaatctgcttggtttttgagcatagaag ggatgaagcttccttgaacaagctcctcgtgaaagcagtggtggacattgttgatgatatgttacaacacatcgtaaatc tttatcccatgagaagaggctcaacactgttcgaaataagggggagcctagaaatggctgaagcgattccttcggaaaga aaggaatgtcctcaatcgtgttcaggtgtgagcgaagaacttttgagaaacagtccaagtgagttagagttgatgcgatt tgttaaaaactggatagatgccaaggataaattcattgtgttaggagtcgaattaggactcaccatgcaaaacatcaatc aaatcgaacacgactgtcaaggcgatctgaatcagaaagtgttctgcatcttgaaaaaatggcttcgactaaaaggaaag acaagttctttcaacgagttgatcaatgccgctggatgtaacaaccatatggtttgcaaggtgttacaggacaaggatga caaagtgtatgatgcaattccaacgaaaagacttgaagaaacctgtactgacgaaatgattgatagtatatccatattca ttgggaaagacttcatccattttggattggaacttggattgagcctcacagacatagaagaaattcaaagtagcgcaggc aggaaaggattctaccatctaaataaaagaatactgaaaacaactcgggacaaaagacttgctgccaacctcagtgtaag aaccctgtgttctgcgcttatcagaatcgatcgctttgactgttttgaaaacttcgtgaaccgattcatccatggacaag agagttttaatgacgattggtag |
|
Protein
| Protein ID | pfu_aug2.0_1288.1_28185.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1288.1_28185.t1 MASGGPEVDEEEVNYLRFSIGVLKVTPQVLRLVFNNRHPDLKTFLAQNKSKCQQLRNSRVLTMDQWNRLYPATGTALLGD FDINLLFILLRNLSNITPHSSGWNKDPLPSDTSIGADLLRLRRIRNEHIHGVNMRMTSIDFGKKWSDLTMEKISRERMIP PEIQAMDDRSMELFINALKKGTYKSYLIRVMLVGYYGVGKTTLSKKLLGLDFDPSIYESTEGIEIHVGHCNMHQETGQWT KGENENTKSLAKSLREHGVIDDMKKEAKKRKTDVDDIRMIKVENSDEEDVDIRMIKVETSDAEAKAENMKEELKNGEILL KEIIEPEPSTVHDRDMSKYTRIQVWDFGGQSNYCTTHQSFLSQRAIYLLLFDISRNLDEDVEDKDLDPSERKKSTVKDFL SFWINSIKTYVGTGKTDPAQILVVGTHLDRVEKHERHKRVQDYMLSIRQAFAKEIADNQVLIDERLMFGFHEEDNIEILK DAIVQTAEKQSYWGEDLPKSWIPFQHHILDIRQKGEEILSMDDIQSFNQSLPVSLDPENIDLCLRFLHSCGSIIFYPEDI LSRFIILEPKLLVDTLRSLITCEQFCYQGSRQEAYKGLKQDGMISKERINEIWNLQPFSTLVTYKDYLLLVMERMDLIAK PVAYQNGSIIDSKFYFIPSMAKESLEKEKWMVTISICKRVHTVFVDFSKSFLSPAVYYRLLSSCICIWPVNHGKLYFGCC QLKLDPMHKLLIRMKGDKICLVFEHRRDEASLNKLLVKAVVDIVDDMLQHIVNLYPMRRGSTLFEIRGSLEMAEAIPSER KECPQSCSGVSEELLRNSPSELELMRFVKNWIDAKDKFIVLGVELGLTMQNINQIEHDCQGDLNQKVFCILKKWLRLKGK TSSFNELINAAGCNNHMVCKVLQDKDDKVYDAIPTKRLEETCTDEMIDSISIFIGKDFIHFGLELGLSLTDIEEIQSSAG RKGFYHLNKRILKTTRDKRLAANLSVRTLCSALIRIDRFDCFENFVNRFIHGQESFNDDW |
|