Gene
| Gene Model ID | pfu_aug2.0_129.1_30248 |
|---|---|
| Locus | scaffold129.1 : 2886 ... 21766 : + |
| To GenomeBrowser | scaffold129.1:2886..21766 |
| Genes list of scaffold | scaffold129.1 |
| Synonym | pfu_aug1.0_2245.1_22924 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_129.1_30248.t2 | 2 | 1 | Glyco_tranf_2_2 | 5 | 27 | 4.2e-06 | 26.0 | 0.53 | 2000.0 | -2.4 |
| pfu_aug2.0_129.1_30248.t2 | 2 | 1 | Glyco_transf_7C | 56 | 110 | 1.9e-20 | 72.0 | 5.1e-24 | 1.9e-20 | 72.0 |
| pfu_aug2.0_129.1_30248.t2 | 2 | 2 | Glyco_tranf_2_2 | 67 | 112 | 4.2e-06 | 26.0 | 1.1e-09 | 4.2e-06 | 26.0 |
| pfu_aug2.0_129.1_30248.t2 | 2 | 2 | Glyco_transf_7C | 207 | 223 | 1.9e-20 | 72.0 | 1.0 | 3800.0 | -2.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_129.1_30248.t2 | gi|253795474|ref|NP_001156727.1| | beta-1,4-galactosyltransferase-like [Acyrthosiphon pisum] | 3.0e-26 |
Transcript
| Transcript ID | pfu_aug2.0_129.1_30248.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_129.1_30248.t1 atgtggaatagactcggttatcatggatacaaagtgaggatgaaactcttgagggaaggaaagaggcggttcaagacaga cggactaaatagtttaaagtataaagtattaaagttggaattcaacaagttgtatacacgcatatatgtagaggttaatg aaaaggagataatgaagctgtataaaaagggacgtgttcgagataaaattaaaccaaaaaagcgacacagttccttcctt aagtgcgaagtcagaagtgcgaagtccgcgaacatgaaaaatgtccattatgagagttatgcattcagaccggttttaaa agcacccctttgtcattataaaagtaaatggtatgggtaccctgcatgtacatacagatttcatgagttcaaaatgagta aattcagaataatgacgcgatcgggtgatactggtgtatga |
|
| Transcript ID | pfu_aug2.0_129.1_30248.t2 |
| Definition | - |
>pfu_aug2.0_129.1_30248.t2 atggaagtgttcaaactttttgcttttatgaagaaaatttcaaaccaattcttatgcaccagacacgtgtttcggaaatt aaatcctcatcagtattacttgaatatagattttatatttggatatgctagtcaatcgaccctacaggaaatttggaacc gcgtattctctgcaaaactaccatataattctatatttggtggcgtgtcagctatatccagaaaagaatttgaaaaagtg aacggattttccaacgttttctttgggtggggcggtgaggacgacgatatgtggaatagactcggttatcatggatacaa agtgaggatgaaactcttgagggaaggaaagaggcggttcaagacagacggactaaatagtttaaagtataaagtattaa agttggaattcaacaagttgtatacacgcatatatgtagaggttaatgaaaaggagataatgaagctgtataaaaaggga cgtgttcgagataaaattaaaccaaaaaagcgacacagttccttccttaagtgcgaagtcagaagtgcgaagtccgcgaa catgaaaaatgtccattatgagagttatgcattcagaccggttttaaaagcacccctttgtcattataaaagtaaatggt atgggtaccctgcatgtacatacagatttcatgagttcaaaatgagtaaattcagaataatgacgcgatcgggtgatact ggtgtatga |
|
Protein
| Protein ID | pfu_aug2.0_129.1_30248.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_129.1_30248.t1 MWNRLGYHGYKVRMKLLREGKRRFKTDGLNSLKYKVLKLEFNKLYTRIYVEVNEKEIMKLYKKGRVRDKIKPKKRHSSFL KCEVRSAKSANMKNVHYESYAFRPVLKAPLCHYKSKWYGYPACTYRFHEFKMSKFRIMTRSGDTGV |
|
| Protein ID | pfu_aug2.0_129.1_30248.t2 |
| Definition | - |
>pfu_aug2.0_129.1_30248.t2 MEVFKLFAFMKKISNQFLCTRHVFRKLNPHQYYLNIDFIFGYASQSTLQEIWNRVFSAKLPYNSIFGGVSAISRKEFEKV NGFSNVFFGWGGEDDDMWNRLGYHGYKVRMKLLREGKRRFKTDGLNSLKYKVLKLEFNKLYTRIYVEVNEKEIMKLYKKG RVRDKIKPKKRHSSFLKCEVRSAKSANMKNVHYESYAFRPVLKAPLCHYKSKWYGYPACTYRFHEFKMSKFRIMTRSGDT GV |
|