Gene
| Gene Model ID | pfu_aug2.0_129.1_30249 |
|---|---|
| Locus | scaffold129.1 : 30108 ... 45935 : - |
| To GenomeBrowser | scaffold129.1:30108..45935 |
| Genes list of scaffold | scaffold129.1 |
| Synonym | pfu_aug1.0_23190.1_47562 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_129.1_30249.t1 | 3 | 1 | Aldedh | 38 | 482 | 0.0 | 597.7 | 0.0 | 0.0 | 515.3 |
| pfu_aug2.0_129.1_30249.t1 | 2 | 1 | DUF1487 | 270 | 323 | 2.6e-07 | 30.1 | 1.9e-07 | 0.00094 | 18.4 |
| pfu_aug2.0_129.1_30249.t1 | 2 | 2 | DUF1487 | 400 | 452 | 2.6e-07 | 30.1 | 0.00014 | 0.71 | 9.0 |
| pfu_aug2.0_129.1_30249.t1 | 3 | 2 | Aldedh | 517 | 615 | 0.0 | 597.7 | 2.8e-17 | 1.4e-13 | 50.0 |
| pfu_aug2.0_129.1_30249.t1 | 3 | 3 | Aldedh | 618 | 681 | 0.0 | 597.7 | 4.2e-11 | 2.1e-07 | 29.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_129.1_30249.t1 | gi|676461677|ref|XP_009056020.1| | hypothetical protein LOTGIDRAFT_216152 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_129.1_30249.t1 | gi|72155909|ref|XP_797815.1| | PREDICTED: aldehyde dehydrogenase family 16 member A1 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_129.1_30249.t1 | gi|260789593|ref|XP_002589830.1| | hypothetical protein BRAFLDRAFT_287353 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_129.1_30249.t1 | gi|46249667|gb|AAH68965.1| | LOC414586 protein, partial [Xenopus laevis] | 0.0 |
| pfu_aug2.0_129.1_30249.t1 | gi|147900524|ref|NP_001089655.1| | aldehyde dehydrogenase 16 family, member A1 [Xenopus laevis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_129.1_30249.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_129.1_30249.t1 atgtgggcatggttagatgatcataacagggcgtttggacatttcatcaatggtgaatgggcatggttagatgaccataa cagggcatttggacatttcatcaatggtgaatgggtaaaaccagagggcaggaaaacttaccaaaccaaaaatccagcta caggtgaggtacttgcgtccaccatccaaggcgagcaggaagatgtggatatggccgtcaaggcagcagagaaggcttat cagtcctggagtaaaacattaccacatgtcagggcaaggcacctttatagcattgctagacacattcagaaacatatgcg tctgttttctgtagtggaagccatggacaacggaaaaacgtttcgtgaaacccgagatgcggacgttcccatagtggtac gtcatttctaccatcatgctggatgggctcaactaatggatacagaaatgagagggtggaaatctgtaggtgtgattgga gccatagtgccttggaattttccgttaatgctgctcacatggaagattgctccagccttagccatgggtaatactgtggt cctgaagcctgccacctacaccaggttatctgctctcctattggctgaggtgtgtgcagaggcggggctaccaccagggg tcttcaatgtcatcacagggggaggagccatgggcagtttgttagctgatcatcgattggtggataaagttgcattcaca ggatccacaggggtcggtcaaacactgaggagattgactgcaggcagtggtaagaagttatctttggagctcggagggaa atcccctgttgtcgtgttcgaatcggctgaccttgacagtgccgtggaaggggttgtagatgctatatggttcaatcaag gacaggtatgcagtgcaggatcacgtttactggtacaagaatccattcacgacaaaatggtagagaaattgaaggaacgt ttgacacatttccgtgtcggagacagtttggacaagggtatggacatgggagccattgttgacgagtctcagagaaaatc tattgatgaatatgtggaagatgctaggaaagaaggtgctcagattttccagtttaaagagagcatccccagtaaaggtt gttactacccaccaactataatcaccaatgttcagacggtgtcacgagtggtcgttgaggagatatttggtcctgtgctg gtagttttaccatttagaactgccaaggagtccatagctctgtctaacaacaccatctacggtctgggtggcagtgtgtg gactgaaaacgtgtcactggcattagaagtggcactcagtatcaaagctggcactatctgggtcaactgccataacctgt ttgatgccgctgcagggtttggtggctacaggcagagtggctatggcagggatggcggcaaggagggattgtttgaatat gtgcgtccagcatgggaagagagaccaaggccagggaaagtagaagacaggacatataagatgtattatggcggagccca aaagcgaccagacgccccctactcccgtccagtggtaaatcctgctggtaaagttgttggccatgttggtgaaggtaaca ggaaggacgtaaggaacgctgtggagaccgcacatgctgcagctccaggctggggtaagagagctgcacataaccgagcc cagatagtatattacatggctgagaatcttgagctgaggagagacgaggtagcggggaggatccaacaaatgacggggcg taagctggaggaatgtaggtcagaggtggatatctccatacagagactgttccactggggagcgtactgtgataaatacg gtggtggtatacaggtgtttgagacgtcagacctgccggctggagttgtcaacatactgaccggtgaccgagaccatctg accaagtatctgacagagcatcaggacattcagtccatgtggtacttcggatctgccgaggggtcaaagttcgtcgagca cgaatctgcggaaaatgtcaagagaacgtgggtgaactacggcatcaatagggactggctggacccagaacaaggtcaag gtgaagagttcttgtatcattctgtccagtgtaagaacatctggatccctatgggtgacatctttgcaaattag |
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Protein
| Protein ID | pfu_aug2.0_129.1_30249.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_129.1_30249.t1 MWAWLDDHNRAFGHFINGEWAWLDDHNRAFGHFINGEWVKPEGRKTYQTKNPATGEVLASTIQGEQEDVDMAVKAAEKAY QSWSKTLPHVRARHLYSIARHIQKHMRLFSVVEAMDNGKTFRETRDADVPIVVRHFYHHAGWAQLMDTEMRGWKSVGVIG AIVPWNFPLMLLTWKIAPALAMGNTVVLKPATYTRLSALLLAEVCAEAGLPPGVFNVITGGGAMGSLLADHRLVDKVAFT GSTGVGQTLRRLTAGSGKKLSLELGGKSPVVVFESADLDSAVEGVVDAIWFNQGQVCSAGSRLLVQESIHDKMVEKLKER LTHFRVGDSLDKGMDMGAIVDESQRKSIDEYVEDARKEGAQIFQFKESIPSKGCYYPPTIITNVQTVSRVVVEEIFGPVL VVLPFRTAKESIALSNNTIYGLGGSVWTENVSLALEVALSIKAGTIWVNCHNLFDAAAGFGGYRQSGYGRDGGKEGLFEY VRPAWEERPRPGKVEDRTYKMYYGGAQKRPDAPYSRPVVNPAGKVVGHVGEGNRKDVRNAVETAHAAAPGWGKRAAHNRA QIVYYMAENLELRRDEVAGRIQQMTGRKLEECRSEVDISIQRLFHWGAYCDKYGGGIQVFETSDLPAGVVNILTGDRDHL TKYLTEHQDIQSMWYFGSAEGSKFVEHESAENVKRTWVNYGINRDWLDPEQGQGEEFLYHSVQCKNIWIPMGDIFAN |
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