Gene
| Gene Model ID | pfu_aug2.0_129.1_30251 |
|---|---|
| Locus | scaffold129.1 : 78124 ... 80585 : - |
| To GenomeBrowser | scaffold129.1:78124..80585 |
| Genes list of scaffold | scaffold129.1 |
| Synonym | pfu_aug1.0_7439.1_52954 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_129.1_30251.t1 | 1 | 1 | HECA | 49 | 150 | 5.10003e-41 | 138.7 | 8.40779e-45 | 1.3e-40 | 137.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_129.1_30251.t1 | gi|676473912|ref|XP_009059974.1| | hypothetical protein LOTGIDRAFT_106234 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_129.1_30251.t1 | gi|340726453|ref|XP_003401572.1| | PREDICTED: headcase protein [Bombus terrestris] | 0.0 |
| pfu_aug2.0_129.1_30251.t1 | gi|380024573|ref|XP_003696069.1| | PREDICTED: headcase protein isoform X1 [Apis florea] | 0.0 |
| pfu_aug2.0_129.1_30251.t1 | gi|759057085|ref|XP_011337787.1| | PREDICTED: headcase protein isoform X1 [Cerapachys biroi] | 0.0 |
| pfu_aug2.0_129.1_30251.t1 | gi|746840749|ref|XP_011050595.1| | PREDICTED: headcase protein isoform X1 [Acromyrmex echinatior] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_129.1_30251.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_129.1_30251.t1 atgccgcaccataagcatcataagaatcaaaagttgaatcgagaagaagtggtgcaaaacctgcctcgtgatgcaaatgc aaacgtgcacggtgagggaaacgtcaacgagcaccgccaacggagaaatggccaggcgacttcgacagagtgctgtgttc cgtctgcatgtctttgccaaggtgagactataaatccctctgatccagatgatgctgtaagagtatattgtaataatgaa gcttgtacaatgggaaattggatgcataaggaatgctttatgcaatgggaggatacagtactggcttatttgaagtcctg cggtcgtgcaagaagctggagtgagaagcaacgtttgcaaaatctctggacgaaaaaaggatacgatcttgctttcaaag catgcgactgcaaatgcggaagggggcacctgcggaaagatcttaattacgttccgccgccgagaaacgacaatgccgca aaagcgaaaaagaagcacaaaaagaagaatgacaaacccgtggccgttgtctccaatgggaaaccagtacctgctacgaa cggaaacgctaatcaatcacaaaccaacaacaattcgaatgctgtaagccatgcgattacaaatcatctgaacaacgtca ataataacgcacagcgtgcgaccgagcgcgtggataacgccggtcgatgccagcttatacgtagcagtccgatagataca cccgtaacagaggaaggaggacgatctatacgaatgcgagcgaatagttgcgaaagtacaggtagctctccgcccaattc ctcggcgtcaactggctctgcatctccggctcccgtttctccgtcgccgtcgtctaatgataactttcctatcaaagcac cacgcccgaagttcgacttcccgccggagactaataactttggaatgtccattttccgacgccgccctgatctctcggct ttcaatgtgctacctaagcataaactgaatccgtatcatatcaagatggaggatgatataccacagggaaacgatgaaat acgcacgtttgtacatacgcaccttagtacgtacaaagtttcgtccatgaactgtgtgctatgtaagaacatgcttcctg tatttgaccgttatcccatgatagacggtactttcttcctgtcgcctcaagcttacgatgatagcgtcgtgcaggtgata tccgatgggcgcctacagttcatcaatgcggtatgcgttggctgtctggagggtggaagtgacgttcgatgcgctgcatg caagcggaagtgggatggaagcgccctgttactcgggaccatgtactcctatgatatctttgcggcgatgccatgttgcc agaagcggctgacttgcaagcagtgtcgacgtgcagtcgtagacgtcactactggtctgaacttttttagcgactatagt cgcatgatagcctgtccgtattgtaaggcgtacgactaccatttcatacgaccaatggcagacaccttcgccgtaaagca acctatatggaattaa |
|
Protein
| Protein ID | pfu_aug2.0_129.1_30251.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_129.1_30251.t1 MPHHKHHKNQKLNREEVVQNLPRDANANVHGEGNVNEHRQRRNGQATSTECCVPSACLCQGETINPSDPDDAVRVYCNNE ACTMGNWMHKECFMQWEDTVLAYLKSCGRARSWSEKQRLQNLWTKKGYDLAFKACDCKCGRGHLRKDLNYVPPPRNDNAA KAKKKHKKKNDKPVAVVSNGKPVPATNGNANQSQTNNNSNAVSHAITNHLNNVNNNAQRATERVDNAGRCQLIRSSPIDT PVTEEGGRSIRMRANSCESTGSSPPNSSASTGSASPAPVSPSPSSNDNFPIKAPRPKFDFPPETNNFGMSIFRRRPDLSA FNVLPKHKLNPYHIKMEDDIPQGNDEIRTFVHTHLSTYKVSSMNCVLCKNMLPVFDRYPMIDGTFFLSPQAYDDSVVQVI SDGRLQFINAVCVGCLEGGSDVRCAACKRKWDGSALLLGTMYSYDIFAAMPCCQKRLTCKQCRRAVVDVTTGLNFFSDYS RMIACPYCKAYDYHFIRPMADTFAVKQPIWN |
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