Gene
| Gene Model ID | pfu_aug2.0_129.1_30253 |
|---|---|
| Locus | scaffold129.1 : 104822 ... 133705 : - |
| To GenomeBrowser | scaffold129.1:104822..133705 |
| Genes list of scaffold | scaffold129.1 |
| Synonym | pfu_aug1.0_81805.1_13242 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_129.1_30253.t1 | 2 | 1 | BSD | 58 | 88 | 1.9e-18 | 65.9 | 0.0029 | 43.0 | 3.9 |
| pfu_aug2.0_129.1_30253.t1 | 2 | 2 | BSD | 171 | 228 | 1.9e-18 | 65.9 | 1.1e-20 | 1.6e-16 | 59.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_129.1_30253.t1 | gi|676473909|ref|XP_009059973.1| | hypothetical protein LOTGIDRAFT_209828 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_129.1_30253.t1 | gi|675885714|ref|XP_009028359.1| | hypothetical protein HELRODRAFT_180810 [Helobdella robusta] | 0.0 |
| pfu_aug2.0_129.1_30253.t1 | gi|524887106|ref|XP_005100142.1| | PREDICTED: synapse-associated protein 1-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_129.1_30253.t1 | gi|260808560|ref|XP_002599075.1| | hypothetical protein BRAFLDRAFT_225122 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_129.1_30253.t1 | gi|657746622|ref|XP_008308578.1| | PREDICTED: synapse-associated protein 1 [Cynoglossus semilaevis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_129.1_30253.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_129.1_30253.t1 atgttcaagtctgttactagctggttgggtgttgttgataataaaacagaagaagaacaagctgaatcaaaggaagagaa ggatgaaaaagtggaagaaaaagtagcagacgaacaaaaagaaagtgaatcaaagaaagaagaaaaaactgctgagaaag atggtgaagacaaagaagatgactctttagaaaaggcgtttgaagaggtgtcatcaaaagcaataaacactgctaaagag tggggaagttatctctattcattcagtaaaacggctggtaagacagtggcagataaagccaaacagttcagcaaacaagt tgaagacaagacattccttggtgactttagtagagaacaggaaaagtttgttacagagaagaaagagaaagaaaacaagg aagaggctgcagtccctccctgggtgggatataatgatgatgaagccatgaagtcacagatactagccctgtccaaggac aggagaaactttttaagaaatccgccatctggagttcagtaccaatttgatttcggagctatgtatcccgttgccatggc aacattacaagaggacccaaatttgcagaaaatgagatttgacttagttcctaaacaaataaatgaagaaacgttttgga agaattacttttatagagtatcattgataaagcagtcatcacaactcacttatttggcacaagaaacaggaagcacaggt gaactgaaatccagcgatgattctcaacagtcatctagagctagctctgaaaaagatcggtccagtccaaaaccaataga gaaagacgtcgagaaggaggtggacttcgcaccaagcagtcccaacgagaacgagtttgttagtgacagtttccaagcag acgatattaatgatgaggaaatgaggaaggagatgcagatgttaggaatggacgactcgaaaaacaagacggaaaaagag gaaggtgaaccttttcgtaaaccatatgaaagaaactattggaaagtgtgctatgaacccacgaatactgataatatccc ccaatgggagaaagagttacaacaggaactacaagattacgagcttgttgatggagcgggagacgtggatgacgccgata ttgaaaacgagattctacagcaaattgagcaagagactaattccgtttga |
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Protein
| Protein ID | pfu_aug2.0_129.1_30253.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_129.1_30253.t1 MFKSVTSWLGVVDNKTEEEQAESKEEKDEKVEEKVADEQKESESKKEEKTAEKDGEDKEDDSLEKAFEEVSSKAINTAKE WGSYLYSFSKTAGKTVADKAKQFSKQVEDKTFLGDFSREQEKFVTEKKEKENKEEAAVPPWVGYNDDEAMKSQILALSKD RRNFLRNPPSGVQYQFDFGAMYPVAMATLQEDPNLQKMRFDLVPKQINEETFWKNYFYRVSLIKQSSQLTYLAQETGSTG ELKSSDDSQQSSRASSEKDRSSPKPIEKDVEKEVDFAPSSPNENEFVSDSFQADDINDEEMRKEMQMLGMDDSKNKTEKE EGEPFRKPYERNYWKVCYEPTNTDNIPQWEKELQQELQDYELVDGAGDVDDADIENEILQQIEQETNSV |
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