Gene
| Gene Model ID | pfu_aug2.0_129.1_30254 |
|---|---|
| Locus | scaffold129.1 : 135506 ... 138465 : - |
| To GenomeBrowser | scaffold129.1:135506..138465 |
| Genes list of scaffold | scaffold129.1 |
| Synonym | pfu_aug1.0_41114.1_55801 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_129.1_30254.t1 | 2 | 1 | rve | 9 | 121 | 5.7e-35 | 120.0 | 1.1e-26 | 3.3e-23 | 82.0 |
| pfu_aug2.0_129.1_30254.t1 | 2 | 2 | rve | 284 | 357 | 5.7e-35 | 120.0 | 2.9e-12 | 8.7e-09 | 35.5 |
| pfu_aug2.0_129.1_30254.t1 | 2 | 1 | zf-H2C2_5 | 414 | 424 | 4.3e-06 | 26.6 | 1.0 | 3000.0 | -1.2 |
| pfu_aug2.0_129.1_30254.t1 | 2 | 2 | zf-H2C2_5 | 430 | 454 | 4.3e-06 | 26.6 | 5.9e-09 | 1.8e-05 | 24.7 |
Transcript
| Transcript ID | pfu_aug2.0_129.1_30254.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_129.1_30254.t1 atgaagcttgtacaaacaggctatccaatggaacgtattgccatcgatatcttgggggaactcccactaacagagtcagg taacaagtacatactcgtaatttcagactactttacaaagtggactgagagttttcccatgcctaacatggaagctcgaa ctgtcgccaagacactagttgagcaggtggtgacaaggtttggcgtaccagcagccatacattccgaccaaggaagtcaa tttgaaagtaatctctttcaggagatgtgtatgctgctgagaatcaataagactcatactacgccatatcaccctcagtc agatgacatggttgagcgcttcaaccgcacgctcactgcaatgttaagcgcctttgtaaatgagaaccacactgactggg acgaacagctgcaatatgtgatgatggcataccgctcgtctgaacatgaaacgactgggttaacgccaaacttcctaatc aataccacaaaacaaatggtgttggatactgcaatgagaatggaaaacgcccattcccacatcaggttacatacagctca gtcaatgcagaggcaaaagcattactatgatagaaaactgcattgggagaaatactcatcgggagacaaagtatgtgtct ttttccctcgagtccaacagggtaagtcacccaagttcacgtcctgctggaagggtcccttcacagtcaagcagaaaatg tctgacataaactatgtagtagactgtggtaagaaaggtatggaccacgntggctgtgagttttgcaccaaaaggaaggg tgagaacaaaaccaaacgtgcaccaatgaagcttgtacaaacaggctatccaatggaacgtattgccatagatatcttgg gggaactgccattaacagagtcaggtaacaagtacatcctcgtaatttcagactactttacgatgtggactgagagtttt cccatgcctaacatggaagctcgtactgtcgccaagacactagttgagcaggtggtgacaaggtttggcgtgccagcagc catacattctgaccaaggaagtcaatttgaaatagactgtggtaagaaaggtatggaccaggttatccatgtcgacagga tgcgacctttgcgttcccagacattgataggtgaatctttagaggaagacagtttggacttgaatacaaatgccgcagat cagactataggaaattcagtagactctgcagtgtgtccgaatgaggagaaatttaaagagcatgtagcattgtttgcact gacagaatacagttgtgatgtgtgcgatttcacatcaaataggccgtgtaatgtgaagcgacactttcagcgagctcaca agggactgacgacaaaccaacagctgattccacttggtcaaacacctgttcaggcagcaaagccgtcagcatcgtcaagt gcatcaaaatctggagacgagtctgattggaaggaacaggatcccggagcattgatagagaataatgattcttccgcaga tgaatcggaatcggatcaagaggacagttctcttctggctggacgactctataggaaacatacgtctccttctcctgtag cctctggcagattggttatccataggtccccagaaacaactcatagtgaagtaacatccaagagaaaatttgaagaaact ggttcacaagctgttgtgccatttgaatcagcgtcaacgcagtcagatggtgttattacatgtgatgtaggagtacagtg cgaaaagtataggaaaagagagaagacaattacagtcacgaagtacactgaaggaggaagggcagtggaaattatccacg aggtagaggaattctacaatatgtga |
|
Protein
| Protein ID | pfu_aug2.0_129.1_30254.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_129.1_30254.t1 MKLVQTGYPMERIAIDILGELPLTESGNKYILVISDYFTKWTESFPMPNMEARTVAKTLVEQVVTRFGVPAAIHSDQGSQ FESNLFQEMCMLLRINKTHTTPYHPQSDDMVERFNRTLTAMLSAFVNENHTDWDEQLQYVMMAYRSSEHETTGLTPNFLI NTTKQMVLDTAMRMENAHSHIRLHTAQSMQRQKHYYDRKLHWEKYSSGDKVCVFFPRVQQGKSPKFTSCWKGPFTVKQKM SDINYVVDCGKKGMDHXGCEFCTKRKGENKTKRAPMKLVQTGYPMERIAIDILGELPLTESGNKYILVISDYFTMWTESF PMPNMEARTVAKTLVEQVVTRFGVPAAIHSDQGSQFEIDCGKKGMDQVIHVDRMRPLRSQTLIGESLEEDSLDLNTNAAD QTIGNSVDSAVCPNEEKFKEHVALFALTEYSCDVCDFTSNRPCNVKRHFQRAHKGLTTNQQLIPLGQTPVQAAKPSASSS ASKSGDESDWKEQDPGALIENNDSSADESESDQEDSSLLAGRLYRKHTSPSPVASGRLVIHRSPETTHSEVTSKRKFEET GSQAVVPFESASTQSDGVITCDVGVQCEKYRKREKTITVTKYTEGGRAVEIIHEVEEFYNM |
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