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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_129.1_30256
Locus scaffold129.1 : 205291 ... 222874 : +
To GenomeBrowser scaffold129.1:205291..222874
Genes list of scaffold scaffold129.1
Synonym pfu_aug1.0_36616.1_48241

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_129.1_30256.t1 gi|241838130|ref|XP_002415202.1| histone deacetylase 4, 5, putative [Ixodes scapularis] 0.0
pfu_aug2.0_129.1_30256.t1 gi|746852406|ref|XP_011056756.1| PREDICTED: histone deacetylase 4 isoform X2 [Acromyrmex echinatior] 0.0
pfu_aug2.0_129.1_30256.t1 gi|328791286|ref|XP_391882.3| PREDICTED: histone deacetylase 5 isoform X11 [Apis mellifera] 0.0
pfu_aug2.0_129.1_30256.t1 gi|242012669|ref|XP_002427051.1| histone deacetylase 7A, putative [Pediculus humanus corporis] 1.4013e-45
pfu_aug2.0_129.1_30256.t1 gi|746852410|ref|XP_011056758.1| PREDICTED: histone deacetylase 4 isoform X4 [Acromyrmex echinatior] 7.00649e-45

Transcript
Transcript IDpfu_aug2.0_129.1_30256.t1
Definition-
>pfu_aug2.0_129.1_30256.t1
atgtcaaggcatctggttttgatgaaacaacaccaagagttcctggaccagcagaagaaattggaggaaagacatcgtct
ggagaaagaaatgctggaaaaagaaagactggagcaaatcaaaaacaaaagggacaatgagcgaagcgcggtagcatcgt
cggaggtaaaggcaaagttacaagaatttgttctgacacggacgcaacgagaggcagcacgaaactccccgccacaattc
aggcagtggatggagcagagttcccctccccaggcggggttatctcccccttatggtccacaccttctagggaaatacga
ggacgactttccgctcaggaaaacagcgtcggaaccaaatcttaaggtacgctctgccttaaagcagaaattagagaggc
gtgtcacccacagtcccttattacgacgtaaagaaaaggccgcgctgttcaaacgcaaagcccccttgtcaaatgtggac
cgtgacgtcaaatttttctcaaacttgatcctcccggagttgggtgctcagacttgttttgattgcaagtttgtaggcga
acaagatggggatctggcgagaaattgggacccgagcacatacccatttgcatccctgtacaggtctatggggtaccatg
gcacagatctctatccctccccatccatgcctaacatctccctgggcaggccgccatcctcatctggaacaaacaattca
tcgtcatcccccacggaagcagagttgcgagctgctcgtctgggcatgtctatacccagtcacatgatgcctgcgggcta
ccccatgtaccccataccaccagcagtgttagacggtgagtacccaccccaaggtaaccaggcgtacatatcggcacaaa
taaaggcattagaggaggctaggagccagagtaagctgggacactcccccctcgctagcccctttgtccccctaccaggg
gcatcaactcctggcagcgcagcgtcagaggcacatcaagctcgtattcataggcatcacaaaccattaggaaggacgca
ctccgcaccgttgccgatcggccatcctttcttacagcaacagagtctattgttgcaacaacaacagcaacagccgcagg
atctggcggcgcaccctacgtccaatacagagcaggctctgaaggataaactgtttgtcaagcagcatatacgacaggcg
gtactacagagggtcggcagcaaatctcacatggaaaatgtggacgaagagacggaggctaaactcgcacaagtaggtct
ttttggtttgtttctgttattagtagagctgtcctatgacttgtgtaagatcttaacatgttaa

Protein
Protein IDpfu_aug2.0_129.1_30256.t1
Definition-
>pfu_aug2.0_129.1_30256.t1
MSRHLVLMKQHQEFLDQQKKLEERHRLEKEMLEKERLEQIKNKRDNERSAVASSEVKAKLQEFVLTRTQREAARNSPPQF
RQWMEQSSPPQAGLSPPYGPHLLGKYEDDFPLRKTASEPNLKVRSALKQKLERRVTHSPLLRRKEKAALFKRKAPLSNVD
RDVKFFSNLILPELGAQTCFDCKFVGEQDGDLARNWDPSTYPFASLYRSMGYHGTDLYPSPSMPNISLGRPPSSSGTNNS
SSSPTEAELRAARLGMSIPSHMMPAGYPMYPIPPAVLDGEYPPQGNQAYISAQIKALEEARSQSKLGHSPLASPFVPLPG
ASTPGSAASEAHQARIHRHHKPLGRTHSAPLPIGHPFLQQQSLLLQQQQQQPQDLAAHPTSNTEQALKDKLFVKQHIRQA
VLQRVGSKSHMENVDEETEAKLAQVGLFGLFLLLVELSYDLCKILTC

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