Gene
| Gene Model ID | pfu_aug2.0_129.1_30257 |
|---|---|
| Locus | scaffold129.1 : 224281 ... 230995 : + |
| To GenomeBrowser | scaffold129.1:224281..230995 |
| Genes list of scaffold | scaffold129.1 |
| Synonym | pfu_aug1.0_57918.1_56236 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_129.1_30257.t1 | 1 | 1 | Hist_deacetyl | 5 | 146 | 1.7e-18 | 66.9 | 1.4e-22 | 2.1e-18 | 66.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_129.1_30257.t1 | gi|704276839|ref|XP_010155830.1| | PREDICTED: histone deacetylase 9-like, partial [Eurypyga helias] | 0.0 |
| pfu_aug2.0_129.1_30257.t1 | gi|704335851|ref|XP_010173624.1| | PREDICTED: histone deacetylase 9-like, partial [Caprimulgus carolinensis] | 0.0 |
| pfu_aug2.0_129.1_30257.t1 | gi|705673092|ref|XP_010115812.1| | PREDICTED: histone deacetylase 9-like [Chlamydotis macqueenii] | 0.0 |
| pfu_aug2.0_129.1_30257.t1 | gi|704188105|ref|XP_010137865.1| | PREDICTED: histone deacetylase 9-like [Buceros rhinoceros silvestris] | 0.0 |
| pfu_aug2.0_129.1_30257.t1 | gi|677968570|ref|XP_009070131.1| | PREDICTED: histone deacetylase 9 isoform X1 [Acanthisitta chloris] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_129.1_30257.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_129.1_30257.t1 atgcataaacaccagtgtcaatgtggtaacaacgccaaccatcccgaacatgctggaagattacaaagtatatggtctcg gttacaagaacgcggtctcatttctcgttgtgagagaattcggagtaggaaagccagtgtagaggaattacaatgttgcc acacggaatcacacgccttgttgtacggtacaaacccactaaatcggcaacggctcgacccacgactatttgaaaatgta catttttgtatgttaccttgtgggggtataggagtggactctgacacagtttggaatgaaatgcacacttatattgctgc aagaacggcggcaggctgtgtcacagaacttgccactagggtagcaaaccgagaactgaagaacggctttgctgtggtac ggccaccaggtcaccatgcagagtcaaatcaggctatgaagaaagacaaaaaaatctatgcattgcatgtcattataaaa atgactatttgtacataa |
|
Protein
| Protein ID | pfu_aug2.0_129.1_30257.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_129.1_30257.t1 MHKHQCQCGNNANHPEHAGRLQSIWSRLQERGLISRCERIRSRKASVEELQCCHTESHALLYGTNPLNRQRLDPRLFENV HFCMLPCGGIGVDSDTVWNEMHTYIAARTAAGCVTELATRVANRELKNGFAVVRPPGHHAESNQAMKKDKKIYALHVIIK MTICT |
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