Gene
| Gene Model ID | pfu_aug2.0_129.1_30263 |
|---|---|
| Locus | scaffold129.1 : 384474 ... 422761 : - |
| To GenomeBrowser | scaffold129.1:384474..422761 |
| Genes list of scaffold | scaffold129.1 |
| Synonym | pfu_aug1.0_25971.1_33537 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_129.1_30263.t1 | 2 | 1 | AA_permease_2 | 23 | 307 | 0.0 | 237.7 | 0.0 | 4.2039e-45 | 153.9 |
| pfu_aug2.0_129.1_30263.t1 | 2 | 1 | AA_permease | 31 | 283 | 5.1e-26 | 91.0 | 1.2e-21 | 4.3e-18 | 64.9 |
| pfu_aug2.0_129.1_30263.t1 | 2 | 2 | AA_permease_2 | 315 | 495 | 0.0 | 237.7 | 3.1e-29 | 1.2e-25 | 89.9 |
| pfu_aug2.0_129.1_30263.t1 | 2 | 2 | AA_permease | 316 | 450 | 5.1e-26 | 91.0 | 1.4e-11 | 5.0e-08 | 31.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_129.1_30263.t1 | gi|524880237|ref|XP_005096785.1| | PREDICTED: large neutral amino acids transporter small subunit 2-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_129.1_30263.t1 | gi|260834791|ref|XP_002612393.1| | hypothetical protein BRAFLDRAFT_280132 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_129.1_30263.t1 | gi|676426036|ref|XP_009044495.1| | hypothetical protein LOTGIDRAFT_184960 [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_129.1_30263.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_129.1_30263.t1 atgacggcgaatggagtagagaaaaaagaagaaagtaaggatgaaggagtgaagttgaaaaggaggataaccctattcaa tggtgtggccattattgtgggatcgatcgtggggtcgggtatcttcgtgacccccaagggcgtgttagctggggccgggt cggtcggtctgtcgttggttgtatgggttggttgtgggtttttgtcgttggttggagccctgtgctatgccgagttagga accacaataagcaggtcaggcggggactatgcctacattctagaggcctttgggccatgcatggccttccttcaactatg ggtcaatttgattatcatccgtcccacagcccaagccgtcgtggcatggacttttggttattacgtcatgcagcctttct tctcggactgtgacccccctcctatcgccaccaaactgtttgccgccttgtgtattagtattttaacctttgtgaaccta gtcagtgtcagagcagctaccagaattcaagatgtttttactatagccaaaattcttgccttgatcatcattactctcac aggctttgttctgattggacaaggtgaaacagaatattttgagaatgcgttcgaggattcctctaaagacgtaggatcaa tctctctagctttttactcgggactttttgcatacgcaggatggaatttcttaaactttgttactgaagaattgatcgac cctttcaaaaacttgccacgagccatctacatttccatccccatcgtaacaattgtttatgtcctgtctaacgtagctta tctaacaatcgtatcgccgggagaattactacaatctaatgcagtagctgtgacttttggcgacaaagcctttggggtca tggcatggattgttcctgtgtttgtatcactttctacnctaagcttacttgtgcaaaaatacataaacttgccacgagcc atctacatttccatccccatcgtaacaattgtttatgtcctgtctaacgtagcttatctaacaatcgtatcgccgggaga attactacaatctaatgcagtagctgtgacttttggcgacaaagcctttggggtcatggcatggattgttcctgtgtttg tatcactttctacattcggaggagtaaatggtcttcttttcacttctggaagacttttctttgttggagctgaagaagga cacttacctcagttttttgctatgattcacatgaagaaatttacaccactgccagccatgttatttactgggttgctgtc tttgatcatgttgatgtctgacgatattttcatcttaatcaactacatgagttttgtccagtggtggtcagtgggaatgt ccatattaggccttatctacttacggataaaacgaccagaaatgccaagacctatcaagtttaacttggccatacctatt ttctttctgatgtgtgtattattcttactgatcttaccgctgacgaaggagccggagtccaccgtaatggccgtagtggt cattctgtccggactccccgtctacttcctgtgcgtcgtgtggaaaaataaacccagatctttccaacgttttgtcgggt tagttccccttggttcttag |
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Protein
| Protein ID | pfu_aug2.0_129.1_30263.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_129.1_30263.t1 MTANGVEKKEESKDEGVKLKRRITLFNGVAIIVGSIVGSGIFVTPKGVLAGAGSVGLSLVVWVGCGFLSLVGALCYAELG TTISRSGGDYAYILEAFGPCMAFLQLWVNLIIIRPTAQAVVAWTFGYYVMQPFFSDCDPPPIATKLFAALCISILTFVNL VSVRAATRIQDVFTIAKILALIIITLTGFVLIGQGETEYFENAFEDSSKDVGSISLAFYSGLFAYAGWNFLNFVTEELID PFKNLPRAIYISIPIVTIVYVLSNVAYLTIVSPGELLQSNAVAVTFGDKAFGVMAWIVPVFVSLSXLSLLVQKYINLPRA IYISIPIVTIVYVLSNVAYLTIVSPGELLQSNAVAVTFGDKAFGVMAWIVPVFVSLSTFGGVNGLLFTSGRLFFVGAEEG HLPQFFAMIHMKKFTPLPAMLFTGLLSLIMLMSDDIFILINYMSFVQWWSVGMSILGLIYLRIKRPEMPRPIKFNLAIPI FFLMCVLFLLILPLTKEPESTVMAVVVILSGLPVYFLCVVWKNKPRSFQRFVGLVPLGS |
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