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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_129.1_30268
Locus scaffold129.1 : 476279 ... 485965 : -
To GenomeBrowser scaffold129.1:476279..485965
Genes list of scaffold scaffold129.1
Synonym pfu_aug1.0_6169.1_23964

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_129.1_30268.t1 gi|524895465|ref|XP_005104215.1| PREDICTED: uncharacterized protein DDB_G0284459-like [Aplysia californica] 1.0e-37
pfu_aug2.0_129.1_30268.t1 gi|390351991|ref|XP_781248.3| PREDICTED: DNA replication factor Cdt1 [Strongylocentrotus purpuratus] 2.0e-34
pfu_aug2.0_129.1_30268.t1 gi|291242730|ref|XP_002741259.1| PREDICTED: DNA replication factor Cdt1-like [Saccoglossus kowalevskii] 8.0e-32
pfu_aug2.0_129.1_30268.t1 gi|634843498|ref|XP_007937354.1| PREDICTED: DNA replication factor Cdt1 [Orycteropus afer afer] 1.0e-30
pfu_aug2.0_129.1_30268.t1 gi|545499538|ref|XP_005620630.1| PREDICTED: DNA replication factor Cdt1 isoform X1 [Canis lupus familiaris] 6.0e-30

Transcript
Transcript IDpfu_aug2.0_129.1_30268.t1
Definition-
>pfu_aug2.0_129.1_30268.t1
atggcacaagcgagagtgacagagtttttctctgccaaaaaacgcacgtttgatgcacaaccatcaaagagacgaaaatt
agcaagtacaaatcaagatgctgaagtttttaatacagtcgatgtgaacgtgagagccacgcgatcgtctctgcgcataa
aaaatgatgtcgccccacgcgctgaaaatgcgccccaacagacgcgatcatcgacaccaaaaccggctgaaaagcctggt
aggaaaccgagagcaaagccaaccaaaggtaaacagataaaagcccagaaaggccagtctaaaatcaaagatgcttttga
gattgtagaggcaaattcgaggccctcctctccagaccaagagcagataactcctaaaccaaaccttgatcaaacagtcc
caactgaggaagttacttcggcttgggatgaacatgacggtccccttacacctagtaaacgacaaaatgaacagaccagt
tccgactctgagggggaaatcctctcccggaaacggaggcgaagaggaacgacgaaagaggtggaaaagacaccattgaa
aaatgcaccaatgccacaaagaaaatcgagaaagaagcttcaaatgagacccaatgttatacagtctagtgacagtgacg
aacaagaggtagaaaaagcccttgaatctgttgctaaggactctgagaaatcaacatcacaatcagcatcagccacaggt
gtggatgtcaaacctaaactagagctaccacagtacaaaggtgttccccaatcactcttagaaaagattcgagccaaaga
agcaaagaaacaggaagaggcaatgatgcggaaccctgaagaggacaagcgtactaagatgttaaatcgtctaccagaaa
tgatgagaatgcttagatcacattttgtaacagagaaaaaaccagcattaccactcgatagtgttatacaaaagcttact
gatagttataggacctctatcagggcagatgatgtggaggcgcatgttaaaatgatggtagaaatctccccagaatggct
gaagatcgtcaaaattaaagccggtagcttcgtcaaaatggatcgaaatattgaccttcaacaagtggcagataaagtga
cgaacatggccaagagatag

Protein
Protein IDpfu_aug2.0_129.1_30268.t1
Definition-
>pfu_aug2.0_129.1_30268.t1
MAQARVTEFFSAKKRTFDAQPSKRRKLASTNQDAEVFNTVDVNVRATRSSLRIKNDVAPRAENAPQQTRSSTPKPAEKPG
RKPRAKPTKGKQIKAQKGQSKIKDAFEIVEANSRPSSPDQEQITPKPNLDQTVPTEEVTSAWDEHDGPLTPSKRQNEQTS
SDSEGEILSRKRRRRGTTKEVEKTPLKNAPMPQRKSRKKLQMRPNVIQSSDSDEQEVEKALESVAKDSEKSTSQSASATG
VDVKPKLELPQYKGVPQSLLEKIRAKEAKKQEEAMMRNPEEDKRTKMLNRLPEMMRMLRSHFVTEKKPALPLDSVIQKLT
DSYRTSIRADDVEAHVKMMVEISPEWLKIVKIKAGSFVKMDRNIDLQQVADKVTNMAKR

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