Gene
| Gene Model ID | pfu_aug2.0_1293.1_11572 |
|---|---|
| Locus | scaffold1293.1 : 74586 ... 109591 : + |
| To GenomeBrowser | scaffold1293.1:74586..109591 |
| Genes list of scaffold | scaffold1293.1 |
| Synonym | pfu_aug1.0_4939.1_52407 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| sorting nexin-33-like | GO:0006810 GO:0031410 GO:0044763 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1293.1_11572.t3 | 2 | 1 | SH3_2 | 43 | 94 | 8.9e-10 | 37.9 | 5.7e-12 | 1.2e-08 | 34.2 |
| pfu_aug2.0_1293.1_11572.t3 | 2 | 1 | SH3_1 | 44 | 89 | 5.3e-13 | 48.1 | 1.0e-13 | 2.2e-10 | 39.7 |
| pfu_aug2.0_1293.1_11572.t3 | 1 | 1 | SH3_9 | 44 | 94 | 2.4e-11 | 43.0 | 2.5e-14 | 5.4e-11 | 41.9 |
| pfu_aug2.0_1293.1_11572.t3 | 2 | 1 | PX | 104 | 126 | 4.0e-21 | 74.9 | 0.66 | 1400.0 | -1.0 |
| pfu_aug2.0_1293.1_11572.t3 | 2 | 2 | SH3_1 | 259 | 277 | 5.3e-13 | 48.1 | 0.0039 | 8.2 | 5.9 |
| pfu_aug2.0_1293.1_11572.t3 | 2 | 2 | SH3_2 | 261 | 277 | 8.9e-10 | 37.9 | 0.14 | 300.0 | 0.9 |
| pfu_aug2.0_1293.1_11572.t3 | 2 | 2 | PX | 288 | 385 | 4.0e-21 | 74.9 | 3.5e-24 | 7.5e-21 | 74.0 |
| pfu_aug2.0_1293.1_11572.t3 | 1 | 1 | BAR_3_WASP_bdg | 388 | 630 | 0.0 | 279.6 | 0.0 | 0.0 | 278.8 |
| pfu_aug2.0_1293.1_11572.t3 | 2 | 1 | Vps5 | 487 | 539 | 3.0e-10 | 39.7 | 8.3e-06 | 0.018 | 14.3 |
| pfu_aug2.0_1293.1_11572.t3 | 2 | 2 | Vps5 | 556 | 627 | 3.0e-10 | 39.7 | 5.5e-09 | 1.2e-05 | 24.7 |
Transcript
| Transcript ID | pfu_aug2.0_1293.1_11572.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1293.1_11572.t1 atgataaagatttggccaactcgcacctgttcggcttatttccctttcgcgtttcagtctatttacagagggcgctatag gcagagttcaatattagaaatcatgacagacttggtacaagccaaatgtctgtatgattttgatggagacgtaaataatg gagaactttcattcagaactggagatgtaatcacaatcacagctagggacattggtgaaggatggtgggaagccagtaat cacagtggggagtcaggactaatccctgaggcatatgtacagctgttagagccaccagaaccgtcatttccaccgccacc accaccagccagtgtcttaccatcaaccaacgacgcctgggacaaccgacaatccacattctctgatccaagctcaggct actcagaaaccaacggtcacgattactcggctggttataatggcggttatagtaaccagaataccgggtttgctggtggt gggtttaatcatcagcagagtgaggagggatgggacagtgactggggggacgaggatgatgatcagacgtctagtagtac agcacctacaaatcctgaactacaagggggagggaactttggtttatctgcaccaaagcgtgataataaacaactctcac ccaagtcagagatgtccagatatggcacagtaaagaaaaactttagcagattttccacatttgcaaaagcaggcggagat gcatatttaatggggcaagtgcaagctaatgtatccgaaagtgacctcatcaaaataattgaaacaaaggatggtgtaga gtggtaccaagcctcacaaccgtacacatgtgccatcaaaactcctaaaaaagagagtaagctgaagggtctgaaaagct tcatgacctaccaactcacaccttctttcagcaatatacaagtgagcaggaggtacaaacattttgattggctacatgag agattagaagagaagtatacgtgtatacctgtacctccactaccggataaagccatagcaggtcgttacgaggatgattt tgtgtcggagaggatgcgatatttacagttatggatggacagaatggttaggcatcctgttatatcacagtcggaagtcc ttaatcatttccttacatgtacagatgacaagaaatggaaggcaggaaagaggaaagcagagaaggatgaataccaaggt ggcaagttcttccttaccttacaaacacctccacatggcttagaaatgagagatgtggacaagaaaatggaaacattttg taaatttgtcaaaaatatggatgacaatgtacggcattctctaactgtgatgcatgataataggaaaaaacatttaggac catataaaagagaattccagaagattggtggttcatttaaacaattagcattaacattcaatctagatacagcgagttat tcacaaaatctaacagcggccatagaccacacagcagacacgtacaatgaaataggagagctcttcgaaaagcagccaaa agaagacattgatccaatgatggaaatgttacatgaatataaaggaatcttgtctgtgtatcctgatgtactaaaagttc atgagggtgctgtgggcaaagcaaaagagtgtgaaaaactgaaagatgaaggtagaatgccggaatcagatgttcaagcc gtgatacaacgagctgatgtgatatcatttggaactatggcagaaatgtcacactttcagagggaaagagttcaagactt caaaagtacaatgcaaacatacctagctggacagatcaaattctataaggagattacacagaaattagaaaatgccttgc agaagtatgatagtgcgtga |
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| Transcript ID | pfu_aug2.0_1293.1_11572.t2 |
| Definition | - |
>pfu_aug2.0_1293.1_11572.t2 atgataaagatttggccaactcgcacctgttcggcttatttccctttcgcgtttcagtctatttacagagggcgctatag gcagagttcaatattagaaatcatgacagacttggtacaagccaaatgtctgtatgattttgatggagacgtaaataatg gagaactttcattcagaactggagatgtaatcacaatcacagctagggacattggtgaaggatggtgggaagccagtaat cacagtggggagtcaggactaatccctgaggcatatgtacagctgttagagccaccagaaccgtcatttccaccgccacc accaccagccagtgtcttaccatcaaccaacgacgcctgggacaaccgacaatccacattctctgatccaagctcaggct actcagaaaccaacggtcacgattactcggctggttataatggcggttatagtaaccagaataccgggtttgctggtggt gggtttaatcatcagcagagtgaggagggatgggacagtgactggggggacgaggatgatgatcagacgtctagtagtac agcacctacaaatcctgaactacaagggggagggaactttggtttatctgcaccaaagcgtgataataaacaactctcac ccaagtcagagatgtccagatatggcacagtaaagaaaaactttagcagattttccacatttgcaaaagcaggcggagat gcatatttaatggggcaagtgcaagctaatgtatccgaaagtgacctcatcaaaataattgaaacaaaggatggtgtaga gtggtaccaagcctcacaaccgtacacatgtgccatcaaaactcctaaaaaagagagtaagctgaagggtctgaaaagct tcatgacctaccaactcacaccttctttcagcaatatacaagtgagcaggaggtacaaacattttgattggctacatgag agattagaagagaagtatacgtgtatacctgtacctccactaccggataaagccatagcaggtcgttacgaggatgattt tgtgtcggagaggatgcgatatttacagttatggatggacagaatggttaggcatcctgttatatcacagtcggaagtcc ttaatcatttccttacatgtacagatgacaagaaatggaaggcaggaaagaggaaagcagagaaggatgaataccaaggt ggcaagttcttccttaccttacaaacacctccacatggcttagaaatgagagatgtggacaagaaaatggaaacattttg taaatttgtcaaaaatatggatgacaatgtacggcattctctaactgtgatgcatgataataggaaaaaacatttaggac catataaaagagaattccagaagattggtggttcatttaaacaattagcattaacattcaatctagatacagcgagttct gatgcatcttaccttgaggattcacaaaatctaacagcggccatagaccacacagcagacacgtacaatgaaataggaga gctcttcgaaaagcagccaaaagaagacattgatccaatgatggaaatgttacatgaatataaaggaatcttgtctgtgt atcctgatgtactaaaagttcatgagggtgctgtgggcaaagcaaaagagtgtgaaaaactgaaagatgaaggtagaatg ccggaatcagatgttcaagccgtgatacaacgagctgatgtgatatcatttggaactatggcagaaatgtcacactttca gagggaaagagttcaagacttcaaaagtacaatgcaaacatacctagctggacagatcaaattctataaggagattacac agaaattagaaaatgccttgcagaagtatgatagtgcgtga |
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| Transcript ID | pfu_aug2.0_1293.1_11572.t3 |
| Definition | - |
>pfu_aug2.0_1293.1_11572.t3 atgataaagatttggccaactcgcacctgttcggcttatttccctttcgcgtttcagtctatttacagagggcgctatag gcagagttcaatattagaaatcatgacagacttggtacaagccaaatgtctgtatgattttgatggagacgtaaataatg gagaactttcattcagaactggagatgtaatcacaatcacagctagggacattggtgaaggatggtgggaagccagtaat cacagtggggagtcaggactaatccctgaggcatatgtacagctgttagagccaccagaaccgtcatttccaccgccacc accaccagccagtgtcttaccatcaaccaacgacgcctgggacaaccgacaatccacattctctgatccaagctcaggct actcagaaaccaacggtcacgattactcggctggttataatggcggttatagtaaccagaataccgggtttgctggtggt gggtttaatcatcagcagagtgaggagggatgggacagtgactggggggacgaggatgatgatcagacgtctagtagtac agcacctacaaatcctccagagccaaccacccctgaactacaagggggagggaactttggtttatctgcaccaaagcgtg ataataaacaactctcacccaagtcagagatgtccagatatggcacagtaaagaaaaactttagcagattttccacattt gcaaaagcaggcggagatgcatatttaatggggcaagtgcaagctaatgtatccgaaagtgacctcatcaaaataattga aacaaaggatggtgtagagtggtaccaagcctcacaaccgtacacatgtgccatcaaaactcctaaaaaagagagtaagc tgaagggtctgaaaagcttcatgacctaccaactcacaccttctttcagcaatatacaagtgagcaggaggtacaaacat tttgattggctacatgagagattagaagagaagtatacgtgtatacctgtacctccactaccggataaagccatagcagg tcgttacgaggatgattttgtgtcggagaggatgcgatatttacagttatggatggacagaatggttaggcatcctgtta tatcacagtcggaagtccttaatcatttccttacatgtacagatgacaagaaatggaaggcaggaaagaggaaagcagag aaggatgaataccaaggtggcaagttcttccttaccttacaaacacctccacatggcttagaaatgagagatgtggacaa gaaaatggaaacattttgtaaatttgtcaaaaatatggatgacaatgtacggcattctctaactgtgatgcatgataata ggaaaaaacatttaggaccatataaaagagaattccagaagattggtggttcatttaaacaattagcattaacattcaat ctagatacagcgagttctgatgcatcttaccttgaggattcacaaaatctaacagcggccatagaccacacagcagacac gtacaatgaaataggagagctcttcgaaaagcagccaaaagaagacattgatccaatgatggaaatgttacatgaatata aaggaatcttgtctgtgtatcctgatgtactaaaagttcatgagggtgctgtgggcaaagcaaaagagtgtgaaaaactg aaagatgaaggtagaatgccggaatcagatgttcaagccgtgatacaacgagctgatgtgatatcatttggaactatggc agaaatgtcacactttcagagggaaagagttcaagacttcaaaagtacaatgcaaacatacctagctggacagatcaaat tctataaggagattacacagaaattagaaaatgccttgcagaagtatgatagtgcgtga |
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Protein
| Protein ID | pfu_aug2.0_1293.1_11572.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1293.1_11572.t1 MIKIWPTRTCSAYFPFAFQSIYRGRYRQSSILEIMTDLVQAKCLYDFDGDVNNGELSFRTGDVITITARDIGEGWWEASN HSGESGLIPEAYVQLLEPPEPSFPPPPPPASVLPSTNDAWDNRQSTFSDPSSGYSETNGHDYSAGYNGGYSNQNTGFAGG GFNHQQSEEGWDSDWGDEDDDQTSSSTAPTNPELQGGGNFGLSAPKRDNKQLSPKSEMSRYGTVKKNFSRFSTFAKAGGD AYLMGQVQANVSESDLIKIIETKDGVEWYQASQPYTCAIKTPKKESKLKGLKSFMTYQLTPSFSNIQVSRRYKHFDWLHE RLEEKYTCIPVPPLPDKAIAGRYEDDFVSERMRYLQLWMDRMVRHPVISQSEVLNHFLTCTDDKKWKAGKRKAEKDEYQG GKFFLTLQTPPHGLEMRDVDKKMETFCKFVKNMDDNVRHSLTVMHDNRKKHLGPYKREFQKIGGSFKQLALTFNLDTASY SQNLTAAIDHTADTYNEIGELFEKQPKEDIDPMMEMLHEYKGILSVYPDVLKVHEGAVGKAKECEKLKDEGRMPESDVQA VIQRADVISFGTMAEMSHFQRERVQDFKSTMQTYLAGQIKFYKEITQKLENALQKYDSA |
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| Protein ID | pfu_aug2.0_1293.1_11572.t2 |
| Definition | - |
>pfu_aug2.0_1293.1_11572.t2 MIKIWPTRTCSAYFPFAFQSIYRGRYRQSSILEIMTDLVQAKCLYDFDGDVNNGELSFRTGDVITITARDIGEGWWEASN HSGESGLIPEAYVQLLEPPEPSFPPPPPPASVLPSTNDAWDNRQSTFSDPSSGYSETNGHDYSAGYNGGYSNQNTGFAGG GFNHQQSEEGWDSDWGDEDDDQTSSSTAPTNPELQGGGNFGLSAPKRDNKQLSPKSEMSRYGTVKKNFSRFSTFAKAGGD AYLMGQVQANVSESDLIKIIETKDGVEWYQASQPYTCAIKTPKKESKLKGLKSFMTYQLTPSFSNIQVSRRYKHFDWLHE RLEEKYTCIPVPPLPDKAIAGRYEDDFVSERMRYLQLWMDRMVRHPVISQSEVLNHFLTCTDDKKWKAGKRKAEKDEYQG GKFFLTLQTPPHGLEMRDVDKKMETFCKFVKNMDDNVRHSLTVMHDNRKKHLGPYKREFQKIGGSFKQLALTFNLDTASS DASYLEDSQNLTAAIDHTADTYNEIGELFEKQPKEDIDPMMEMLHEYKGILSVYPDVLKVHEGAVGKAKECEKLKDEGRM PESDVQAVIQRADVISFGTMAEMSHFQRERVQDFKSTMQTYLAGQIKFYKEITQKLENALQKYDSA |
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| Protein ID | pfu_aug2.0_1293.1_11572.t3 |
| Definition | - |
>pfu_aug2.0_1293.1_11572.t3 MIKIWPTRTCSAYFPFAFQSIYRGRYRQSSILEIMTDLVQAKCLYDFDGDVNNGELSFRTGDVITITARDIGEGWWEASN HSGESGLIPEAYVQLLEPPEPSFPPPPPPASVLPSTNDAWDNRQSTFSDPSSGYSETNGHDYSAGYNGGYSNQNTGFAGG GFNHQQSEEGWDSDWGDEDDDQTSSSTAPTNPPEPTTPELQGGGNFGLSAPKRDNKQLSPKSEMSRYGTVKKNFSRFSTF AKAGGDAYLMGQVQANVSESDLIKIIETKDGVEWYQASQPYTCAIKTPKKESKLKGLKSFMTYQLTPSFSNIQVSRRYKH FDWLHERLEEKYTCIPVPPLPDKAIAGRYEDDFVSERMRYLQLWMDRMVRHPVISQSEVLNHFLTCTDDKKWKAGKRKAE KDEYQGGKFFLTLQTPPHGLEMRDVDKKMETFCKFVKNMDDNVRHSLTVMHDNRKKHLGPYKREFQKIGGSFKQLALTFN LDTASSDASYLEDSQNLTAAIDHTADTYNEIGELFEKQPKEDIDPMMEMLHEYKGILSVYPDVLKVHEGAVGKAKECEKL KDEGRMPESDVQAVIQRADVISFGTMAEMSHFQRERVQDFKSTMQTYLAGQIKFYKEITQKLENALQKYDSA |
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