Gene
| Gene Model ID | pfu_aug2.0_12933.1_13141 |
|---|---|
| Locus | scaffold12933.1 : 1 ... 3694 : - |
| To GenomeBrowser | scaffold12933.1:1..3694 |
| Genes list of scaffold | scaffold12933.1 |
| Synonym | pfu_aug1.0_11285.1_24866 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| isopentenyl-diphosphate delta-isomerase 1 | GO:0004452 GO:0008299 GO:0016787 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_12933.1_13141.t1 | 1 | 1 | NUDIX | 43 | 112 | 4.6e-15 | 55.4 | 7.3e-19 | 5.4e-15 | 55.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_12933.1_13141.t1 | gi|586527955|ref|XP_006918902.1| | PREDICTED: isopentenyl-diphosphate Delta-isomerase 1 [Pteropus alecto] | 2.0e-34 |
| pfu_aug2.0_12933.1_13141.t1 | gi|759180662|ref|XP_011379210.1| | PREDICTED: isopentenyl-diphosphate Delta-isomerase 1 [Pteropus vampyrus] | 2.0e-34 |
| pfu_aug2.0_12933.1_13141.t1 | gi|260804109|ref|XP_002596931.1| | hypothetical protein BRAFLDRAFT_76431 [Branchiostoma floridae] | 2.0e-33 |
| pfu_aug2.0_12933.1_13141.t1 | gi|524866115|ref|XP_005089882.1| | PREDICTED: isopentenyl-diphosphate Delta-isomerase 1-like isoform X2 [Aplysia californica] | 4.0e-33 |
| pfu_aug2.0_12933.1_13141.t1 | gi|524866113|ref|XP_005089881.1| | PREDICTED: isopentenyl-diphosphate Delta-isomerase 1-like isoform X1 [Aplysia californica] | 1.0e-32 |
Transcript
| Transcript ID | pfu_aug2.0_12933.1_13141.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_12933.1_13141.t1 ccacaagaactaacggttgaaggcaaaaatgagggggtggacagggacaaagggaggggagagaaaggggtgggaggagg gaagaagggggcgagaggagggacagatgattgggagggactgttgcacagagctttcagtgttttactgtttaatacag atggtaaacttctccttcagcaaagatctatggctaaaattacatttccaggttattttaccaatacatgctgtagtcac ccattaaatacagaactagaattagaggaagcaggtgcattaggtgttaaaagagctgctcaaagaaaactggaacatga gctcggcatatcaccaaatcag |
|
Protein
| Protein ID | pfu_aug2.0_12933.1_13141.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_12933.1_13141.t1 PQELTVEGKNEGVDRDKGRGEKGVGGGKKGARGGTDDWEGLLHRAFSVLLFNTDGKLLLQQRSMAKITFPGYFTNTCCSH PLNTELELEEAGALGVKRAAQRKLEHELGISPNQ |
|