Gene
| Gene Model ID | pfu_aug2.0_12945.1_19795 |
|---|---|
| Locus | scaffold12945.1 : 1 ... 3687 : - |
| To GenomeBrowser | scaffold12945.1:1..3687 |
| Genes list of scaffold | scaffold12945.1 |
| Synonym | pfu_aug1.0_1519.1_66006 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_12945.1_19795.t1 | 6 | 1 | EGF_CA | 9 | 45 | 6.0e-09 | 35.7 | 0.0011 | 2.3 | 8.3 |
| pfu_aug2.0_12945.1_19795.t1 | 6 | 1 | EGF | 10 | 39 | 8.60397e-43 | 143.8 | 1.4e-12 | 3.1e-09 | 36.6 |
| pfu_aug2.0_12945.1_19795.t1 | 6 | 1 | EGF_2 | 13 | 41 | 5.3e-14 | 52.0 | 1.1e-05 | 0.022 | 14.8 |
| pfu_aug2.0_12945.1_19795.t1 | 6 | 1 | EGF_3 | 13 | 38 | 3.9e-06 | 26.7 | 1.7e-06 | 0.0037 | 17.1 |
| pfu_aug2.0_12945.1_19795.t1 | 6 | 1 | hEGF | 30 | 41 | 1.0e-12 | 47.2 | 9.5e-08 | 0.0002 | 21.2 |
| pfu_aug2.0_12945.1_19795.t1 | 6 | 2 | EGF | 47 | 79 | 8.60397e-43 | 143.8 | 8.8e-11 | 1.9e-07 | 30.9 |
| pfu_aug2.0_12945.1_19795.t1 | 6 | 2 | EGF_CA | 49 | 76 | 6.0e-09 | 35.7 | 7.0 | 15000.0 | -5.3 |
| pfu_aug2.0_12945.1_19795.t1 | 6 | 2 | EGF_2 | 51 | 80 | 5.3e-14 | 52.0 | 0.0045 | 9.6 | 6.4 |
| pfu_aug2.0_12945.1_19795.t1 | 6 | 2 | EGF_3 | 51 | 77 | 3.9e-06 | 26.7 | 0.00011 | 0.23 | 11.4 |
| pfu_aug2.0_12945.1_19795.t1 | 6 | 2 | hEGF | 69 | 80 | 1.0e-12 | 47.2 | 0.0043 | 9.1 | 6.6 |
| pfu_aug2.0_12945.1_19795.t1 | 6 | 3 | EGF_CA | 84 | 114 | 6.0e-09 | 35.7 | 6.9e-08 | 0.00015 | 21.7 |
| pfu_aug2.0_12945.1_19795.t1 | 6 | 3 | EGF | 87 | 116 | 8.60397e-43 | 143.8 | 2.3e-11 | 4.8e-08 | 32.8 |
| pfu_aug2.0_12945.1_19795.t1 | 6 | 3 | EGF_2 | 87 | 118 | 5.3e-14 | 52.0 | 5.4e-06 | 0.011 | 15.8 |
| pfu_aug2.0_12945.1_19795.t1 | 6 | 3 | EGF_3 | 90 | 115 | 3.9e-06 | 26.7 | 0.0068 | 14.0 | 5.7 |
| pfu_aug2.0_12945.1_19795.t1 | 6 | 3 | hEGF | 107 | 118 | 1.0e-12 | 47.2 | 2.2e-05 | 0.047 | 13.7 |
| pfu_aug2.0_12945.1_19795.t1 | 6 | 4 | EGF | 125 | 157 | 8.60397e-43 | 143.8 | 2.2e-10 | 4.7e-07 | 29.6 |
| pfu_aug2.0_12945.1_19795.t1 | 6 | 4 | EGF_CA | 125 | 157 | 6.0e-09 | 35.7 | 0.0047 | 9.9 | 6.2 |
| pfu_aug2.0_12945.1_19795.t1 | 6 | 4 | EGF_3 | 128 | 155 | 3.9e-06 | 26.7 | 0.00045 | 0.96 | 9.4 |
| pfu_aug2.0_12945.1_19795.t1 | 6 | 4 | EGF_2 | 129 | 158 | 5.3e-14 | 52.0 | 0.00038 | 0.8 | 9.9 |
| pfu_aug2.0_12945.1_19795.t1 | 6 | 4 | hEGF | 147 | 158 | 1.0e-12 | 47.2 | 4.9e-06 | 0.01 | 15.8 |
| pfu_aug2.0_12945.1_19795.t1 | 6 | 5 | EGF_CA | 161 | 201 | 6.0e-09 | 35.7 | 9.4e-10 | 2.0e-06 | 27.6 |
| pfu_aug2.0_12945.1_19795.t1 | 6 | 5 | EGF | 165 | 195 | 8.60397e-43 | 143.8 | 2.9e-12 | 6.1e-09 | 35.6 |
| pfu_aug2.0_12945.1_19795.t1 | 6 | 5 | EGF_2 | 165 | 196 | 5.3e-14 | 52.0 | 6.4e-08 | 0.00014 | 21.9 |
| pfu_aug2.0_12945.1_19795.t1 | 6 | 5 | EGF_3 | 168 | 194 | 3.9e-06 | 26.7 | 9.7e-07 | 0.0021 | 18.0 |
| pfu_aug2.0_12945.1_19795.t1 | 6 | 5 | hEGF | 185 | 196 | 1.0e-12 | 47.2 | 1.7e-06 | 0.0037 | 17.2 |
| pfu_aug2.0_12945.1_19795.t1 | 6 | 6 | EGF_CA | 194 | 222 | 6.0e-09 | 35.7 | 7.0 | 15000.0 | -5.1 |
| pfu_aug2.0_12945.1_19795.t1 | 6 | 6 | EGF_2 | 201 | 226 | 5.3e-14 | 52.0 | 1.2e-05 | 0.025 | 14.7 |
| pfu_aug2.0_12945.1_19795.t1 | 6 | 6 | EGF | 203 | 224 | 8.60397e-43 | 143.8 | 0.0005 | 1.1 | 9.3 |
| pfu_aug2.0_12945.1_19795.t1 | 6 | 6 | EGF_3 | 203 | 223 | 3.9e-06 | 26.7 | 7.0 | 15000.0 | -6.0 |
| pfu_aug2.0_12945.1_19795.t1 | 6 | 6 | hEGF | 215 | 226 | 1.0e-12 | 47.2 | 0.2 | 420.0 | 1.4 |
| pfu_aug2.0_12945.1_19795.t1 | 1 | 1 | Laminin_G_3 | 250 | 342 | 3.0e-06 | 27.5 | 2.9e-09 | 6.2e-06 | 26.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_12945.1_19795.t1 | gi|524877318|ref|XP_005095363.1| | PREDICTED: uncharacterized protein LOC101864054 isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_12945.1_19795.t1 | gi|260823778|ref|XP_002606845.1| | hypothetical protein BRAFLDRAFT_103547 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_12945.1_19795.t1 | gi|260818868|ref|XP_002604604.1| | hypothetical protein BRAFLDRAFT_126772 [Branchiostoma floridae] | 0.0 |
| pfu_aug2.0_12945.1_19795.t1 | gi|350413330|ref|XP_003489961.1| | PREDICTED: sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 isoform X1 [Bombus impatiens] | 0.0 |
| pfu_aug2.0_12945.1_19795.t1 | gi|571574259|ref|XP_006562665.1| | PREDICTED: uncharacterized protein LOC412825 isoform X1 [Apis mellifera] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_12945.1_19795.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_12945.1_19795.t1 ggcgtcactgtaacattgaggtactcgagtgtggatccagtccttgtcaacacggcgcgacgtgccaagatttacaaaac gactatttatgtaaatgtcctcccggctttactggaaaagactgctcaattcccaacagctgtctgtccaccccttgttt caataatggaacatgccagtacacagatgacaggagtgattattattgtacatgtgggcggggcttcagtggaagtaggt gtgagattaacattgatgaatgtgcctccgacccctgtcaaaacagtggaacatgccatgactttgtcaatggattcaga tgcaggtgccaggagggttggtccggaccgttctgtgagatagaggaggacccatgtctaagtcaaccatgtcaaaacgg tgctacgtgtgtcaagtactctggaacaaccggttataactgtctctgtgtggatggatatacaggtagtaattgtgaaa atgacatagacgaatgcagcccctccccctgtcaaaatggtggaatttgtcagaatctgattggtgaattcttgtgtaca tgccctagtggattcagtggtgatacctgccagaatgggaaatgtcctgagtgtaaaaatggtggtcagtgtgtgaatgg tagatgccaatgtggaccacggtacatcggagaggattgtgggaaagagaaagtcccagattttgacctgttcttccctg gtacatttgccagcagtcattcagatgtacagacagtgactgacacaacaattctgtccgtctgtctgtgggttagattt ctacaacctggtggacacgggacattctttacactattcggagagagcagtgagggagatatgatgtcaccgtttcttca tatgaatgggagtggcgtatcaatatccagggatagcgatagatttgtgacgtcctttgtgaacgatggacgctggcatc acctgtgttatacgtgggagagggaagtaggatgggctgtgtacttggacggtctagagaaagaagcaggtgcaggacaa agtaacacactccctagcag |
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Protein
| Protein ID | pfu_aug2.0_12945.1_19795.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_12945.1_19795.t1 RHCNIEVLECGSSPCQHGATCQDLQNDYLCKCPPGFTGKDCSIPNSCLSTPCFNNGTCQYTDDRSDYYCTCGRGFSGSRC EINIDECASDPCQNSGTCHDFVNGFRCRCQEGWSGPFCEIEEDPCLSQPCQNGATCVKYSGTTGYNCLCVDGYTGSNCEN DIDECSPSPCQNGGICQNLIGEFLCTCPSGFSGDTCQNGKCPECKNGGQCVNGRCQCGPRYIGEDCGKEKVPDFDLFFPG TFASSHSDVQTVTDTTILSVCLWVRFLQPGGHGTFFTLFGESSEGDMMSPFLHMNGSGVSISRDSDRFVTSFVNDGRWHH LCYTWEREVGWAVYLDGLEKEAGAGQSNTLPS |
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