Gene
| Gene Model ID | pfu_aug2.0_1298.1_28189 |
|---|---|
| Locus | scaffold1298.1 : 69638 ... 101265 : - |
| To GenomeBrowser | scaffold1298.1:69638..101265 |
| Genes list of scaffold | scaffold1298.1 |
| Synonym | pfu_aug1.0_5691.1_59853 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_1298.1_28189.t1 | 3 | 1 | ABC2_membrane_3 | 24 | 72 | 8.0e-19 | 67.8 | 0.1 | 220.0 | 0.6 |
| pfu_aug2.0_1298.1_28189.t1 | 5 | 1 | AAA_21 | 158 | 192 | 3.9e-09 | 36.8 | 0.54 | 1200.0 | -0.8 |
| pfu_aug2.0_1298.1_28189.t1 | 5 | 2 | AAA_21 | 508 | 592 | 3.9e-09 | 36.8 | 1.0 | 2100.0 | -1.7 |
| pfu_aug2.0_1298.1_28189.t1 | 3 | 2 | ABC2_membrane_3 | 664 | 886 | 8.0e-19 | 67.8 | 3.0e-21 | 6.4e-18 | 64.8 |
| pfu_aug2.0_1298.1_28189.t1 | 1 | 1 | ABC_tran | 988 | 1131 | 1.8e-28 | 99.5 | 2.9e-31 | 6.1e-28 | 97.8 |
| pfu_aug2.0_1298.1_28189.t1 | 5 | 3 | AAA_21 | 999 | 1026 | 3.9e-09 | 36.8 | 0.00026 | 0.56 | 10.1 |
| pfu_aug2.0_1298.1_28189.t1 | 5 | 4 | AAA_21 | 1103 | 1159 | 3.9e-09 | 36.8 | 6.3e-09 | 1.3e-05 | 25.2 |
| pfu_aug2.0_1298.1_28189.t1 | 5 | 5 | AAA_21 | 1360 | 1539 | 3.9e-09 | 36.8 | 0.016 | 33.0 | 4.3 |
| pfu_aug2.0_1298.1_28189.t1 | 3 | 3 | ABC2_membrane_3 | 1479 | 1510 | 8.0e-19 | 67.8 | 0.0091 | 19.0 | 4.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_1298.1_28189.t1 | gi|641781480|ref|XP_008173321.1| | PREDICTED: ATP-binding cassette sub-family A member 2 isoform X4 [Chrysemys picta bellii] | 0.0 |
| pfu_aug2.0_1298.1_28189.t1 | gi|696980410|ref|XP_009559019.1| | PREDICTED: ATP-binding cassette sub-family A member 2 [Cuculus canorus] | 0.0 |
| pfu_aug2.0_1298.1_28189.t1 | gi|556972421|ref|XP_005994418.1| | PREDICTED: ATP-binding cassette sub-family A member 2 [Latimeria chalumnae] | 0.0 |
| pfu_aug2.0_1298.1_28189.t1 | gi|641781477|ref|XP_008173320.1| | PREDICTED: ATP-binding cassette sub-family A member 2 isoform X2 [Chrysemys picta bellii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_1298.1_28189.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1298.1_28189.t1 atgggtttctgtcaccagtacagacttttattatggaaaaattttacattgaagaaaaggagcccgtttgtgttgctgtt tgagctatgtatccccctggtgttgtttgttatattgttactgatcaggaagaagcagcctgcagtccctgctcatggaa gtgtgagcgttgagtctttattgaatagtaccagtgattttgttgaattcttgaaatacaatttatcgcttccatcagaa gatattgatgcattactgaactctacaattcatttaaaagagatttacagactgctgtttggaacaaatcttatattgag tcaaagcaatattcatgtaccaagtcttagagcgaaacgtgacgttggacttccattctccgctgcaaaggagttatcaa aaatgctcggagatcaaatcaagcaacagttgtcttcccatttaaataacgtgacgaaaaatcaaagcaatatttctcac ttcaaaaaaattcaaaacaatacagatttgttgaggcagttcgtacaatcctctctgccgaattttaagaggaggctcct ttatgacgtcatagatacagacgatttatggcaggacaaaaacgttcagatgatactggaatccatattatttccaaatc attcagaagtttcaccacatgagatagccgacacattaaagctactcctgttctccccagccgccatacacaagattgtt tgcgacaaagacgaattcttgaaaatcttctctccaagctcagcaactaacgtatcagatttagtggacgcacaggagag gctgtgtcaactcaaccaatcacagatcgtggaattgtcacatgttctcaaacgtgagatttctgactctgccatcattc aagatctccaaaagttttatcagtttcaagaaagtctttatgagatgacagtgtttgccgagaatttacctcaagatgct tgtaacgctacgattgatttcaatcaagatggagaaaatgttaccatggcaacaaacaacaccacaccccatcctgatgt cgacaatgaaaacaaaaaagacaaagagaagaagcaattaccaaaacaaccaccaaagcagaacaaattttccggtctgt tacacctatggaataccatgcagaagacgatatgtggaaaacccccacccaacctaccaaaagaaaggatcgaacatgat atcaatagccttaacttaagagacctagggatatcagtgcatcaacagaacaacttggtgatattggtccatgttctata taataaccccagagtgttgtatgctccgaataattcagcagccgaccagatcataaaaaaggctaatgagtcctttgcca tgattgatctgatgagtgaatatgccagaaaatggctgaacgtatcggcagaaataagaacgtacctactggaaaacaca acggcacagcacctcgcctctattcaacagatgcaaagagaaatccgaatgagcactggagtaatatccaagtttatcaa aaacagcaaactgatcaaagagttcttagaatcgccagttcccagtattcccttcttcctacacgagctggacatcatcg ataacgctgcatgtagctggttgtcgttgatgtcgggaataaatctgaacgtatttaaaggatttaagacagaggaggac ctggtcaactattttcagaataaagcttactcggaaaatgtcactgctgtggccggagttgtgtttgagaacataaagcc aggtgaaaaattacctgcacatgtcaagtacaagatccgtcagaatgctactttcactttcaccacaaagtccgtacgta gcaggttttggatgccagggccgggtgcatggcaacatccttattatcagtttggatttatctggatccaggatataatg gagagagctataatagatatgcaggtgggaagggatgtggtagaaccaggtagctacgtacaacagttcccacagtcctg ttacctatacgaccaatttgtatctatgatagagcatgttatgccactatgcctaactatatcctgggtgtatactgtct ctatgttagtacagagtatagtgtatgaaaaggaacagagactaaaagaggtaatgagaatgatgggattgagtaatgcc gtccattggtgtgcgtggtttacggtagtgttcgtacagatgacggtaaccatgtgtgttcttacggtgatgctgaaggt cggtgaagtgttgacctatagtaatccgtacattgtcttcatcgtactggagatatttgctatcgttaccatttgcttct cgttcctagtgagcacatgttattccaaggccaaagtagcggcagcctgtgctggcatcgtatatttcctgacatatgtg ccatacatgtatgtcgctatcagagaggatgtagctggtgaccaaatctctgccgtcgtcaaagcagccgtgtcgttgtt ttccaccactgcatttggtctgagtgggaagtactttgcgttctatgagaaggagggtgtgggtgtacagtggtacaaca tacacttatcaccggtagagaacgaccagtttaaccttttgacctgtataatgatgatggtcatggacaccttcctgtac tgtatactgtcatggtatattgaaaacgtcttcccaggatcttatggtttacccaagccttggtacttcctgttcacaag gcagtactggtgtggtggtacgtacaagtcgtccgagatagactgtactcatgtactggacatgtgccgtcggcacggac atacttaccagcttatcggagatgaggaacaggcgtgcggcatggaaccaagagatgctgaatttgctcggaggtttgag tcggaacccacccatatcccacttggtgtgagcatcgttaatctgaccaagatctataaaacgggaaagaaattggcagt aaacaaacttagcttaaacctgtttgaagaccagataacgtcatttctgggtcacaatggggccggcaaaactactacta tgtccatactgacagggttatttccccctacatctggccacgcggtcatatatgataatgacatcagaacagaaatggac gagatccggcagagtttgggaatgtgtccacaacataatgtattatttgataaacttacagtagaagaacatctgtggtt ttatgctcgactgaaaggaatgaagggctatgacatcaaacaagaaatggaaacaatgatcgaagatgttggtttaccaa agaagcggcactttaaggtagactgcctgtccggtggtatgcagaggaaattgtctgttgccatagcttttgtcggcggt tcacaaatggttattttggatgaaccaacggctggtgtagatccatatgccaggcgagctatctgggacttacttatcaa atacaaacatggaagaacaattctattgtctacccatcacatggacgaggctgatatattaggagacaggatcgctatta tttctaacggagaattgaagtgctgtggttcgtcaatcttccttaagaacacgtttggagacggataccatttatatttg gtcaagaaagcttccgaagaagacattaccagtacagatttgtcagatgtgagtgaacaaaacggcaaacgggctgtaaa tgagtccttcgtctcacgatgcaaggcctcaaaagtgacagatttcatcaacaagcatgtatctacagcttatcttaaat cggaaagtaacagggagctacattacatcctgccttttgaagaagcaaagaagggaaattttgagaaacttttcagtcaa ctagattcgaaaatggagcagctacatttaacaagttatggtgtcatggataccaacttggaagaagttttcctgaaggt cacagaggcaggtttagcagaagaagaagctgaagacaataagtctgaaaatgcaagctcggtgaatcatttggacctaa atctctcagatcaagatcagatcgacacgactttgccgtcagactcattcaacatggagacaaatgggattaacgcttca gatagtacgtcagtaacggtttctaattctctgggttttgacgttggtaccgtgtcaagaagaggacattttaggacagc cagtaacattagtaacatttcattggaggaaattcagaacatggagaacagccgatttagcgaagacgacagtatcattg tacctgatagcactcacaagggaggatactctaaattagctacagaagatacatttagtgcagaatctgacagtgcctcg tatgccaagtcccgccttgaaggaaaaggctcatatgtactcagcaagaactatttacgtctcaaccaattcagggcgat tatcgtcaaaagattccattatatcactaggaattggaaaggactgttttcacagatcattttgccggcattatttattt ccgttgccatgacagtggccctgtcggcacctcaggtcgatgacatgccgcctattgaactttcaccttctcagtatttc aacatcactcaaccgagaggaaattacattccgtttacggacgaaagtcagggaaccatgaacaagccgacattctcaaa agatgccggtccaaatcggatgatgaatacatttcgtcttgcttcgggtgttggtgctacgtgcgttttaagatcggcat acaacagtacatttgatgtagattggattcatagtgctaattatagtgataaaaattttgagttgttgcggagatattat agtgacaaatgcggtagtgtgtttgtttccgggatccatattgccagctatacaccacaagtcccttttgttcatcccaa aaatctaaaaaacggcacctctatcaaaccagtgcctagtaagtttgttttacttctcctaaaagattag |
|
Protein
| Protein ID | pfu_aug2.0_1298.1_28189.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_1298.1_28189.t1 MGFCHQYRLLLWKNFTLKKRSPFVLLFELCIPLVLFVILLLIRKKQPAVPAHGSVSVESLLNSTSDFVEFLKYNLSLPSE DIDALLNSTIHLKEIYRLLFGTNLILSQSNIHVPSLRAKRDVGLPFSAAKELSKMLGDQIKQQLSSHLNNVTKNQSNISH FKKIQNNTDLLRQFVQSSLPNFKRRLLYDVIDTDDLWQDKNVQMILESILFPNHSEVSPHEIADTLKLLLFSPAAIHKIV CDKDEFLKIFSPSSATNVSDLVDAQERLCQLNQSQIVELSHVLKREISDSAIIQDLQKFYQFQESLYEMTVFAENLPQDA CNATIDFNQDGENVTMATNNTTPHPDVDNENKKDKEKKQLPKQPPKQNKFSGLLHLWNTMQKTICGKPPPNLPKERIEHD INSLNLRDLGISVHQQNNLVILVHVLYNNPRVLYAPNNSAADQIIKKANESFAMIDLMSEYARKWLNVSAEIRTYLLENT TAQHLASIQQMQREIRMSTGVISKFIKNSKLIKEFLESPVPSIPFFLHELDIIDNAACSWLSLMSGINLNVFKGFKTEED LVNYFQNKAYSENVTAVAGVVFENIKPGEKLPAHVKYKIRQNATFTFTTKSVRSRFWMPGPGAWQHPYYQFGFIWIQDIM ERAIIDMQVGRDVVEPGSYVQQFPQSCYLYDQFVSMIEHVMPLCLTISWVYTVSMLVQSIVYEKEQRLKEVMRMMGLSNA VHWCAWFTVVFVQMTVTMCVLTVMLKVGEVLTYSNPYIVFIVLEIFAIVTICFSFLVSTCYSKAKVAAACAGIVYFLTYV PYMYVAIREDVAGDQISAVVKAAVSLFSTTAFGLSGKYFAFYEKEGVGVQWYNIHLSPVENDQFNLLTCIMMMVMDTFLY CILSWYIENVFPGSYGLPKPWYFLFTRQYWCGGTYKSSEIDCTHVLDMCRRHGHTYQLIGDEEQACGMEPRDAEFARRFE SEPTHIPLGVSIVNLTKIYKTGKKLAVNKLSLNLFEDQITSFLGHNGAGKTTTMSILTGLFPPTSGHAVIYDNDIRTEMD EIRQSLGMCPQHNVLFDKLTVEEHLWFYARLKGMKGYDIKQEMETMIEDVGLPKKRHFKVDCLSGGMQRKLSVAIAFVGG SQMVILDEPTAGVDPYARRAIWDLLIKYKHGRTILLSTHHMDEADILGDRIAIISNGELKCCGSSIFLKNTFGDGYHLYL VKKASEEDITSTDLSDVSEQNGKRAVNESFVSRCKASKVTDFINKHVSTAYLKSESNRELHYILPFEEAKKGNFEKLFSQ LDSKMEQLHLTSYGVMDTNLEEVFLKVTEAGLAEEEAEDNKSENASSVNHLDLNLSDQDQIDTTLPSDSFNMETNGINAS DSTSVTVSNSLGFDVGTVSRRGHFRTASNISNISLEEIQNMENSRFSEDDSIIVPDSTHKGGYSKLATEDTFSAESDSAS YAKSRLEGKGSYVLSKNYLRLNQFRAIIVKRFHYITRNWKGLFSQIILPALFISVAMTVALSAPQVDDMPPIELSPSQYF NITQPRGNYIPFTDESQGTMNKPTFSKDAGPNRMMNTFRLASGVGATCVLRSAYNSTFDVDWIHSANYSDKNFELLRRYY SDKCGSVFVSGIHIASYTPQVPFVHPKNLKNGTSIKPVPSKFVLLLLKD |
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